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  • Top cofit genes for Rru_A2050 from Rhodospirillum rubrum S1H

    Secretion protein HlyD (NCBI)
    SEED: RND efflux system, membrane fusion protein CmeA
    KEGG: membrane fusion protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3149 Protein of unknown function DUF214 (NCBI) no 0.73
    2 Rru_A0336 hypothetical protein (NCBI) no 0.73
    3 Rru_A1064 Plasmid maintenance system killer (NCBI) no 0.71
    4 Rru_A2393 hypothetical protein (NCBI) no 0.69
    5 Rru_A1706 Lytic murein transglycosylase (NCBI) 0.56 0.68
    6 Rru_A1735 hypothetical protein (NCBI) no 0.67
    7 Rru_A3626 Glucose inhibited division protein (NCBI) no 0.66
    8 Rru_A2293 hypothetical protein (NCBI) no 0.65
    9 Rru_A3195 Helix-turn-helix protein, CopG (NCBI) no 0.65
    10 Rru_A2773 hypothetical protein (NCBI) no 0.62
    11 Rru_A0377 Signal Transduction Histidine Kinase (STHK), LytS (NCBI) 0.74 0.61
    12 Rru_A0863 ABC transporter, transmembrane region (NCBI) no 0.61
    13 Rru_A0599 Phosphate ABC transporter, permease protein PstC (NCBI) no 0.61
    14 Rru_A2070 FAD dependent oxidoreductase (NCBI) no 0.60
    15 Rru_A1441 Transcriptional Regulator, MarR family (NCBI) no 0.60
    16 Rru_A1807 OmpA/MotB (NCBI) no 0.60
    17 Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) 0.99 0.58
    18 Rru_A1926 hypothetical protein (NCBI) no 0.58
    19 Rru_A1707 hypothetical protein (NCBI) no 0.58
    20 Rru_A1439 Putative FecR (NCBI) 0.29 0.58

    Or look for negative cofitness