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  • Top cofit genes for Rru_A2048 from Rhodospirillum rubrum S1H

    ABC transporter component (NCBI)
    SEED: Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2)
    KEGG: putative spermidine/putrescine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2723 Rubrerythrin (NCBI) no 0.48
    2 Rru_A1655 Hemerythrin HHE cation binding region (NCBI) no 0.48
    3 Rru_A0809 hypothetical protein (NCBI) no 0.47
    4 Rru_A2871 Peptidase M20D, amidohydrolase (NCBI) 0.22 0.47
    5 Rru_A1147 Acetylornithine and succinylornithine aminotransferase (NCBI) no 0.47
    6 Rru_A0717 phage repressor (NCBI) no 0.46
    7 Rru_A2918 hypothetical protein (NCBI) no 0.46
    8 Rru_A2813 Molybdopterin cofactor biosynthesis MoaC region (NCBI) no 0.45
    9 Rru_A3482 Transcriptional Regulator, MarR family (NCBI) no 0.44
    10 Rru_A3072 MscS Mechanosensitive ion channel (NCBI) no 0.44
    11 Rru_A2331 hypothetical protein (NCBI) no 0.44
    12 Rru_A1148 hypothetical protein (NCBI) no 0.43
    13 Rru_A1725 Carbonate dehydratase (NCBI) no 0.43
    14 Rru_A1293 chemotaxis sensory transducer (NCBI) 0.35 0.43
    15 Rru_A2621 Peptidase S49 (NCBI) no 0.42
    16 Rru_A0213 hypothetical protein (NCBI) no 0.42
    17 Rru_A3172 Lysine exporter protein (LYSE/YGGA) (NCBI) 0.52 0.41
    18 Rru_A2265 Electron transfer flavoprotein-ubiquinone oxidoreductase (NCBI) no 0.40
    19 Rru_A2326 Response regulator receiver domain protein (CheY) (NCBI) no 0.40
    20 Rru_A0379 Flavodoxin, long chain (NCBI) no 0.40

    Or look for negative cofitness