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    • Top cofit genes for Rru_A2042 from Rhodospirillum rubrum S1H

    Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI)
    SEED: Transcriptional regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1127 ISBm1, transposase orfB (NCBI) no 0.63
    2 Rru_A3149 Protein of unknown function DUF214 (NCBI) no 0.63
    3 Rru_A0915 hypothetical protein (NCBI) no 0.63
    4 Rru_A0888 Transcriptional Regulator, TetR family (NCBI) no 0.63
    5 Rru_A2321 chemotaxis sensory transducer (NCBI) 0.33 0.62
    6 Rru_A0336 hypothetical protein (NCBI) no 0.61
    7 Rru_A0894 stress protein (NCBI) no 0.61
    8 Rru_A1777 Beta-N-acetylhexosaminidase (NCBI) no 0.61
    9 Rru_A2194 MaoC-like dehydratase (NCBI) no 0.60
    10 Rru_A0372 hypothetical protein (NCBI) no 0.60
    11 Rru_A1478 HPr kinase (NCBI) no 0.59
    12 Rru_A3195 Helix-turn-helix protein, CopG (NCBI) no 0.59
    13 Rru_A0599 Phosphate ABC transporter, permease protein PstC (NCBI) no 0.59
    14 Rru_A0773 Nitrogenase (NCBI) no 0.59
    15 Rru_A2154 Biopolymer transport protein ExbD/TolR (NCBI) no 0.58
    16 Rru_A2870 integral membrane protein TerC (NCBI) no 0.58
    17 Rru_A1926 hypothetical protein (NCBI) no 0.58
    18 Rru_A0198 hypothetical protein (NCBI) no 0.57
    19 Rru_A3528 hypothetical protein (NCBI) no 0.56
    20 Rru_A1477 hypothetical protein (NCBI) no 0.56

    Or look for negative cofitness