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  • Top cofit genes for Rru_A2014 from Rhodospirillum rubrum S1H

    Twin-arginine translocation pathway signal (NCBI)
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1863 Glutathione peroxidase (NCBI) no 0.64
    2 Rru_A0298 Aldehyde dehydrogenase (NAD+) (NCBI) no 0.61
    3 Rru_A1831 hypothetical protein (NCBI) no 0.60
    4 Rru_A2756 hypothetical protein (NCBI) no 0.59
    5 Rru_A2844 Flageller protein FlgA (NCBI) no 0.57
    6 Rru_A2960 no description no 0.57
    7 Rru_A3054 Ribonuclease H (NCBI) no 0.57
    8 Rru_A2804 ABC transporter component (NCBI) no 0.57
    9 Rru_A0981 Binding-protein-dependent transport systems inner membrane component (NCBI) no 0.56
    10 Rru_A3158 hypothetical protein (NCBI) no 0.55
    11 Rru_A2480 Methylmalonyl-CoA mutase (NCBI) no 0.55
    12 Rru_A3036 Helicase c2 (NCBI) no 0.54
    13 Rru_A0164 Sulfate transporter/antisigma-factor antagonist (NCBI) 0.59 0.54
    14 Rru_A3695 Acetoacetyl-CoA synthase (NCBI) 0.44 0.54
    15 Rru_A3206 Response regulator receiver domain protein (CheY) (NCBI) 0.28 0.53
    16 Rru_A0692 Response regulator receiver domain protein (CheY) (NCBI) no 0.53
    17 Rru_A0401 hypothetical protein (NCBI) no 0.52
    18 Rru_A2228 Putative diguanylate cyclase (GGDEF domain) (NCBI) no 0.52
    19 Rru_A2079 Glutamate--ammonia ligase (NCBI) no 0.52
    20 Rru_A2000 hypothetical protein (NCBI) no 0.52

    Or look for negative cofitness