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  • Top cofit genes for Rru_A2012 from Rhodospirillum rubrum S1H

    Binding-protein-dependent transport systems inner membrane component (NCBI)
    SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0516 GCN5-related N-acetyltransferase (NCBI) no 0.73
    2 Rru_A3551 Aldo/keto reductase (NCBI) no 0.72
    3 Rru_A2852 hypothetical protein (NCBI) no 0.69
    4 Rru_A1303 Imidazolonepropionase (NCBI) no 0.68
    5 Rru_A1363 inner-membrane translocator (NCBI) no 0.67
    6 Rru_A1624 hypothetical protein (NCBI) no 0.64
    7 Rru_A1257 hypothetical protein (NCBI) no 0.63
    8 Rru_A0391 hypothetical protein (NCBI) no 0.63
    9 Rru_A2814 Molybdopterin converting factor, subunit 1 (NCBI) no 0.62
    10 Rru_A0102 Putative diguanylate cyclase (GGDEF domain) (NCBI) no 0.58
    11 Rru_A0504 Peptidase M23B (NCBI) no 0.58
    12 Rru_A2781 Protein of unknown function UPF0261 (NCBI) no 0.57
    13 Rru_A3033 hypothetical protein (NCBI) no 0.57
    14 Rru_A1807 OmpA/MotB (NCBI) no 0.55
    15 Rru_B0031 hypothetical protein (NCBI) no 0.54
    16 Rru_A3081 Protein of unknown function DUF891 (NCBI) no 0.52
    17 Rru_A0930 Iron-containing alcohol dehydrogenase (NCBI) no 0.52
    18 Rru_A0387 Antibiotic biosynthesis monooxygenase (NCBI) no 0.52
    19 Rru_A0323 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) no 0.52
    20 Rru_A1394 nitrogenase iron-iron protein, alpha chain (NCBI) no 0.52

    Or look for negative cofitness