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Cofit
Protein
Homologs
Top cofit genes for Rru_A2003 from
Rhodospirillum rubrum S1H
Radical SAM (NCBI)
SEED: Fe-S OXIDOREDUCTASE (1.8.-.-)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A3718
hypothetical protein (NCBI)
no
0.74
2
Rru
_A0934
hypothetical protein (NCBI)
no
0.69
3
Rru
_A1791
ABC-2 transporter component (NCBI)
0.41
0.67
4
Rru
_A0318
4Fe-4S ferredoxin, iron-sulfur binding (NCBI)
no
0.67
5
Rru
_A0013
hypothetical protein (NCBI)
no
0.65
6
Rru
_A0254
NAD-dependent epimerase/dehydratase (NCBI)
no
0.64
7
Rru
_A0340
CRISPR-associated helicase Cas3, core (NCBI)
no
0.64
8
Rru
_A1847
Transglutaminase-like (NCBI)
no
0.64
9
Rru
_A3466
Ornithine aminotransferase (NCBI)
no
0.63
10
Rru
_A0720
Transcriptional Regulator, MarR family (NCBI)
no
0.63
11
Rru
_A1736
hypothetical protein (NCBI)
no
0.62
12
Rru
_A2185
Pyruvate ferredoxin/flavodoxin oxidoreductase (NCBI)
no
0.62
13
Rru
_A0303
hypothetical protein (NCBI)
no
0.61
14
Rru
_A3753
hypothetical protein (NCBI)
no
0.60
15
Rru
_A2076
chemotaxis sensory transducer (NCBI)
no
0.59
16
Rru
_A3484
Secretion protein HlyD (NCBI)
no
0.59
17
Rru
_A2894
ABC transporter component (NCBI)
no
0.59
18
Rru
_A1377
hypothetical protein (NCBI)
no
0.59
19
Rru
_A2006
L-carnitine dehydratase/bile acid-inducible protein F (NCBI)
0.27
0.59
20
Rru
_A3510
ABC transporter component (NCBI)
no
0.59
Or look for
negative cofitness