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  • Top cofit genes for Rru_A1995 from Rhodospirillum rubrum S1H

    Divalent cation transporter (NCBI)
    SEED: Mg/Co/Ni transporter MgtE / CBS domain
    KEGG: magnesium transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2767 ribonuclease G (RNase G) (NCBI) no 0.59
    2 Rru_A3686 Alanine dehydrogenase and pyridine nucleotide transhydrogenase (NCBI) 0.32 0.53
    3 Rru_A1400 CheW protein (NCBI) no 0.53
    4 Rru_A1412 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) no 0.51
    5 Rru_A2359 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) 0.19 0.49
    6 Rru_A2356 extracellular solute-binding protein, family 5 (NCBI) 0.72 0.48
    7 Rru_A3602 Smr protein/MutS2-like (NCBI) 0.27 0.47
    8 Rru_A2333 chemotaxis sensory transducer (NCBI) no 0.46
    9 Rru_A2287 Protein of unknown function DUF86 (NCBI) no 0.46
    10 Rru_A0566 hypothetical protein (NCBI) no 0.46
    11 Rru_A1736 hypothetical protein (NCBI) no 0.46
    12 Rru_A2961 hypothetical protein (NCBI) 0.23 0.46
    13 Rru_A1607 4-alpha-glucanotransferase (NCBI) no 0.45
    14 Rru_A2897 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) 0.69 0.43
    15 Rru_A0086 Protein of unknown function DUF188 (NCBI) no 0.43
    16 Rru_A1905 ABC transporter component (NCBI) no 0.43
    17 Rru_A2297 Ribokinase (NCBI) no 0.43
    18 Rru_A0502 hypothetical protein (NCBI) no 0.42
    19 Rru_A3220 TonB-dependent receptor (NCBI) no 0.42
    20 Rru_A0064 squalene-phytoene synthase (NCBI) no 0.42

    Or look for negative cofitness