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  • Top cofit genes for Rru_A1921 from Rhodospirillum rubrum S1H

    ABC transporter component (NCBI)
    SEED: Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1645 Protein of unknown function DUF192 (NCBI) no 0.52
    2 Rru_A0987 Glutathione S-transferase-like (NCBI) no 0.52
    3 Rru_A2323 Two component CheB methylesterase (NCBI) 0.62 0.50
    4 Rru_A1910 Cyclopropane-fatty-acyl-phospholipid synthase (NCBI) no 0.50
    5 Rru_A2464 Hydroxypyruvate reductase (NCBI) no 0.50
    6 Rru_A0017 Bacitracin resistance protein BacA (NCBI) no 0.49
    7 Rru_A0489 Periplasmic binding protein (NCBI) no 0.48
    8 Rru_A3660 tRNA and rRNA cytosine-C5-methylase (NCBI) no 0.48
    9 Rru_A1698 Cation efflux protein (NCBI) 0.18 0.48
    10 Rru_A1141 Protein of unknown function UPF0001 (NCBI) no 0.47
    11 Rru_A1461 2-isopropylmalate synthase (RefSeq) no 0.47
    12 Rru_A0490 transport system permease protein (NCBI) no 0.46
    13 Rru_A1835 Butyryl-CoA dehydrogenase (NCBI) no 0.46
    14 Rru_A0892 stress protein (NCBI) no 0.46
    15 Rru_A3142 Type III effector Hrp-dependent outers (NCBI) no 0.46
    16 Rru_A2296 Protein of unknown function DUF165 (NCBI) no 0.45
    17 Rru_A0242 Type III restriction enzyme, res subunit (NCBI) no 0.45
    18 Rru_A2889 hypothetical protein (NCBI) no 0.45
    19 Rru_A2057 Molybdopterin-guanine dinucleotide biosynthesis MobB region (NCBI) no 0.44
    20 Rru_A0400 hypothetical protein (NCBI) no 0.44

    Or look for negative cofitness