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  • Top cofit genes for Rru_A1908 from Rhodospirillum rubrum S1H

    Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI)
    SEED: diguanylate cyclase (GGDEF domain) with PAS/PAC sensor

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1130 Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) no 0.62
    2 Rru_A0309 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) no 0.58
    3 Rru_A3306 inner-membrane translocator (NCBI) no 0.54
    4 Rru_A0555 Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) no 0.53
    5 Rru_B0035 Death-on-curing protein (NCBI) no 0.53
    6 Rru_A3102 sugar transferase (NCBI) no 0.53
    7 Rru_A2479 Methylmalonyl-CoA mutase-like (NCBI) no 0.50
    8 Rru_A3161 hypothetical protein (NCBI) no 0.50
    9 Rru_A1460 Asparagine synthase (NCBI) no 0.49
    10 Rru_A2182 NAD(P)(+) transhydrogenase (AB-specific) (NCBI) no 0.49
    11 Rru_A3216 hypothetical protein (NCBI) no 0.49
    12 Rru_A0779 extracellular solute-binding protein, family 3 (NCBI) no 0.49
    13 Rru_A1488 Metallophosphoesterase (NCBI) no 0.48
    14 Rru_A2362 Protein-methionine-S-oxide reductase (NCBI) no 0.48
    15 Rru_A3386 BioY protein (NCBI) no 0.48
    16 Rru_A3539 GlnB (protein PII) uridylyltransferase, GlnD (NCBI) no 0.47
    17 Rru_A0256 GCN5-related N-acetyltransferase (NCBI) no 0.47
    18 Rru_A0354 Phage integrase (NCBI) no 0.47
    19 Rru_A3545 Na+/H+ antiporter (NCBI) no 0.46
    20 Rru_A1624 hypothetical protein (NCBI) no 0.46

    Or look for negative cofitness