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  • Top cofit genes for Rru_A1890 from Rhodospirillum rubrum S1H

    hypothetical protein (NCBI)
    SEED: Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2363 Endonuclease/exonuclease/phosphatase (NCBI) no 0.87
    2 Rru_A0574 Carboxylyase-related protein (NCBI) no 0.86
    3 Rru_A0206 Cobalt chelatase, pCobS small subunit (NCBI) no 0.85
    4 Rru_A2935 PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) no 0.84
    5 Rru_A1837 Porphobilinogen synthase (NCBI) no 0.84
    6 Rru_A3393 Penicillin-binding protein 1A (NCBI) no 0.83
    7 Rru_A1804 N-acetyltransferase (NCBI) no 0.81
    8 Rru_A1536 UvrD/REP helicase (NCBI) no 0.81
    9 Rru_A3547 hypothetical protein (NCBI) no 0.81
    10 Rru_A2100 Protein of unknown function DUF81 (NCBI) no 0.79
    11 Rru_A0155 Transcriptional Regulator, TetR family (NCBI) no 0.78
    12 Rru_A3533 hypothetical protein (NCBI) no 0.78
    13 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) no 0.78
    14 Rru_A0207 Cobalt chelatase, CobT subunit (NCBI) no 0.78
    15 Rru_A3694 hypothetical protein (NCBI) no 0.77
    16 Rru_A1775 chromosome segregation and condensation protein ScpA (NCBI) no 0.77
    17 Rru_A1571 metallo-beta-lactamase (NCBI) no 0.76
    18 Rru_A2399 conserved hypothetical protein VC1941 (NCBI) no 0.75
    19 Rru_A0683 3-deoxy-7-phosphoheptulonate synthase (NCBI) no 0.75
    20 Rru_A2847 Transcriptional regulators, TraR/DksA family (NCBI) no 0.75

    Or look for negative cofitness