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  • Top cofit genes for Rru_A1749 from Rhodospirillum rubrum S1H

    ABC transporter component (NCBI)
    SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1748 ABC transporter component (NCBI) 0.94 0.81
    2 Rru_A1750 inner-membrane translocator (NCBI) 0.98 0.76
    3 Rru_A1300 N-formylglutamate deformylase (NCBI) no 0.75
    4 Rru_A1751 inner-membrane translocator (NCBI) 0.97 0.75
    5 Rru_A1746 Extracellular ligand-binding receptor (NCBI) 0.94 0.71
    6 Rru_A3259 ChaC-like protein (NCBI) no 0.70
    7 Rru_A2401 RuBisCO transcriptional regulator cbbR, LysR family (NCBI) 0.36 0.68
    8 Rru_A3691 Transport-associated (NCBI) no 0.67
    9 Rru_A2783 Predicted periplasmic ligand-binding sensor protein (NCBI) no 0.66
    10 Rru_A2998 Acetate kinase (NCBI) no 0.65
    11 Rru_A2786 inner-membrane translocator (NCBI) no 0.63
    12 Rru_A2652 hypothetical protein (NCBI) no 0.63
    13 Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) 0.54 0.63
    14 Rru_A2997 Phosphate acetyltransferase (NCBI) 0.30 0.62
    15 Rru_A2919 hypothetical protein (NCBI) no 0.62
    16 Rru_A3282 hypothetical protein (NCBI) no 0.62
    17 Rru_A1302 Formiminoglutamate deiminase (NCBI) 0.80 0.61
    18 Rru_A1970 PTS fructose IIC component (NCBI) 0.46 0.61
    19 Rru_A2296 Protein of unknown function DUF165 (NCBI) no 0.60
    20 Rru_A0281 Queuosine biosynthesis protein (NCBI) 0.69 0.60

    Or look for negative cofitness