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Cofit
Protein
Homologs
Top cofit genes for Rru_A1724 from
Rhodospirillum rubrum S1H
ThiJ/PfpI (NCBI)
SEED: ThiJ/PfpI family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A1741
Phage integrase (NCBI)
no
0.62
2
Rru
_A1166
hydrogenase expression/formation protein hupH (NCBI)
no
0.60
3
Rru
_A2142
chemotaxis sensory transducer (NCBI)
no
0.59
4
Rru
_A0579
Glycosyl transferase, group 1 (NCBI)
no
0.55
5
Rru
_A3348
Protein of unknown function DUF195 (NCBI)
no
0.54
6
Rru
_A0198
hypothetical protein (NCBI)
no
0.54
7
Rru
_A0201
Endonuclease/exonuclease/phosphatase (NCBI)
no
0.53
8
Rru
_A3725
ABC transporter component (NCBI)
no
0.53
9
Rru
_A2921
TPR repeat (NCBI)
no
0.53
10
Rru
_A0186
hypothetical protein (NCBI)
no
0.52
11
Rru
_A2227
GCN5-related N-acetyltransferase (NCBI)
no
0.52
12
Rru
_A3641
Ribonuclease PH (NCBI)
0.50
0.52
13
Rru
_A0722
Sigma-24 (FecI) (NCBI)
no
0.52
14
Rru
_A1107
hypothetical protein (NCBI)
no
0.51
15
Rru
_A3144
sulfite reductase (NCBI)
no
0.51
16
Rru
_A0163
Transcriptional Regulator, XRE family (NCBI)
no
0.51
17
Rru
_A3179
GCN5-related N-acetyltransferase (NCBI)
no
0.50
18
Rru
_A1345
hypothetical protein (NCBI)
no
0.50
19
Rru
_A1117
Secretion protein HlyD (NCBI)
no
0.49
20
Rru
_A2743
Radical SAM (NCBI)
no
0.48
Or look for
negative cofitness