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  • Top cofit genes for Rru_A1712 from Rhodospirillum rubrum S1H

    chemotaxis sensory transducer (NCBI)
    SEED: Methyl-accepting chemotaxis protein
    KEGG: methyl-accepting chemotaxis protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2542 circadian clock protein KaiC (NCBI) no 0.66
    2 Rru_A2533 Flagellar hook capping protein (NCBI) no 0.61
    3 Rru_A1790 ABC-2 transporter component (NCBI) no 0.58
    4 Rru_A0306 Hydrogenase formation HypD protein (NCBI) no 0.57
    5 Rru_B0020 Major facilitator superfamily MFS_1 (NCBI) no 0.56
    6 Rru_A2808 periplasmic protein-probably involved in high-affinity Fe2+ transport (NCBI) no 0.54
    7 Rru_A0633 Exonuclease (NCBI) no 0.54
    8 Rru_A1988 GCN5-related N-acetyltransferase (NCBI) no 0.53
    9 Rru_A2784 Basic membrane lipoprotein (NCBI) no 0.53
    10 Rru_A2369 hypothetical protein (NCBI) 0.43 0.52
    11 Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) no 0.51
    12 Rru_A1403 chemotaxis sensory transducer (NCBI) no 0.50
    13 Rru_A0724 Protein of unknown function DUF1365 (NCBI) no 0.50
    14 Rru_A0285 Aldehyde dehydrogenase (NCBI) no 0.50
    15 Rru_A3241 chemotaxis sensory transducer (NCBI) no 0.49
    16 Rru_A2333 chemotaxis sensory transducer (NCBI) no 0.49
    17 Rru_A0487 Alpha/beta hydrolase fold (NCBI) no 0.49
    18 Rru_A2299 inner-membrane translocator (NCBI) no 0.49
    19 Rru_A3587 hypothetical protein (NCBI) no 0.48
    20 Rru_A3390 hypothetical protein (NCBI) no 0.48

    Or look for negative cofitness