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  • Top cofit genes for Rru_A1700 from Rhodospirillum rubrum S1H

    TatD-related deoxyribonuclease (NCBI)
    SEED: Putative deoxyribonuclease YcfH
    KEGG: TatD DNase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2176 Binding-protein-dependent transport systems inner membrane component (NCBI) no 0.67
    2 Rru_A2781 Protein of unknown function UPF0261 (NCBI) no 0.58
    3 Rru_A1699 Beta-lactamase-like (NCBI) 0.54 0.57
    4 Rru_A2998 Acetate kinase (NCBI) no 0.55
    5 Rru_A0309 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) no 0.55
    6 Rru_A2222 Molybdopterin biosynthesis protein (NCBI) no 0.54
    7 Rru_A1336 Periplasmic binding protein/LacI transcriptional regulator (NCBI) no 0.52
    8 Rru_A3691 Transport-associated (NCBI) no 0.52
    9 Rru_A0767 ABC transporter component (NCBI) 0.36 0.52
    10 Rru_A2707 Alpha/beta hydrolase fold (NCBI) 0.54 0.51
    11 Rru_A0450 Uncharacterized protein predicted to be involved in DNA repair-like (NCBI) no 0.50
    12 Rru_A3653 Protein of unknown function DUF214 (NCBI) 0.66 0.50
    13 Rru_A1685 Small GTP-binding protein domain (NCBI) 0.52 0.50
    14 Rru_A1341 Dak phosphatase (NCBI) no 0.47
    15 Rru_A3760 regulatory protein GntR (NCBI) no 0.47
    16 Rru_A0816 hypothetical protein (NCBI) no 0.47
    17 Rru_A2612 UspA (NCBI) no 0.47
    18 Rru_A1624 hypothetical protein (NCBI) no 0.46
    19 Rru_A2599 Tat-translocated enzyme (NCBI) 0.58 0.46
    20 Rru_B0041 Transcriptional Regulator, XRE family (NCBI) no 0.46

    Or look for negative cofitness