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Cofit
Protein
Homologs
Top cofit genes for Rru_A1610 from
Rhodospirillum rubrum S1H
hypothetical protein (NCBI)
SEED: DNA alkylation repair enzyme
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A2315
PepSY-associated TM helix (NCBI)
no
0.69
2
Rru
_A0331
Protein of unknown function DUF6, transmembrane (NCBI)
no
0.68
3
Rru
_A0381
Major facilitator superfamily transporter MFS_1 (NCBI)
no
0.59
4
Rru
_A0307
Hydrogenase expression/formation protein (HUPF/HYPC) (NCBI)
no
0.53
5
Rru
_A2880
hypothetical protein (NCBI)
no
0.53
6
Rru
_A1906
Sulfate transporter/antisigma-factor antagonist (NCBI)
no
0.52
7
Rru
_A0287
hypothetical protein (NCBI)
no
0.52
8
Rru
_A3137
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI)
no
0.52
9
Rru
_A0797
major facilitator transporter superfamily MFS_1 (NCBI)
no
0.52
10
Rru
_A3648
Aminoglycoside phosphotransferase (NCBI)
no
0.51
11
Rru
_A1347
Transcriptional Regulator, GntR family (NCBI)
no
0.51
12
Rru
_A3092
Parallel beta-helix repeat (NCBI)
no
0.51
13
Rru
_A1518
hypothetical protein (NCBI)
no
0.51
14
Rru
_A3494
Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation (NCBI)
no
0.50
15
Rru
_A2454
hypothetical protein (NCBI)
no
0.50
16
Rru
_A1690
MazG (NCBI)
no
0.50
17
Rru
_A0449
Radical SAM (NCBI)
no
0.50
18
Rru
_A3060
hypothetical protein (NCBI)
no
0.50
19
Rru
_A2082
Hemerythrin HHE cation binding region (NCBI)
no
0.49
20
Rru
_A2039
conserved hypothetical protein Rv2307c (NCBI)
no
0.49
Or look for
negative cofitness