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  • Top cofit genes for Rru_A1593 from Rhodospirillum rubrum S1H

    Peptidase M50, putative membrane-associated zinc metallopeptidase (NCBI)
    KEGG: regulator of sigma E protease

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2161 Polyphosphate kinase (NCBI) 0.81 0.84
    2 Rru_A3067 Transcriptional Regulator, TetR family (NCBI) no 0.80
    3 Rru_A1883 Magnesium and cobalt transport protein CorA (NCBI) no 0.72
    4 Rru_A2192 Peptidase M3B, oligoendopeptidase-related clade 3 (NCBI) no 0.71
    5 Rru_A0628 PUCC protein (NCBI) no 0.70
    6 Rru_A1798 Type I secretion outer membrane protein, TolC (NCBI) no 0.70
    7 Rru_A2193 Abc1 protein (NCBI) no 0.70
    8 Rru_A0556 Formyltetrahydrofolate deformylase (NCBI) 0.75 0.69
    9 Rru_A0644 hypothetical protein (NCBI) no 0.69
    10 Rru_A0629 Geranylgeranyl reductase (NCBI) no 0.68
    11 Rru_A0614 hypothetical protein (NCBI) no 0.68
    12 Rru_A3492 Periplasmic Sensor Hybrid Histidine Kinase (NCBI) no 0.66
    13 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.47 0.65
    14 Rru_A1339 Transcriptional Regulator, DeoR family (NCBI) no 0.64
    15 Rru_A2513 Acetyl-CoA hydrolase/transferase (NCBI) no 0.63
    16 Rru_A1695 Protein of unknown function DUF411 (NCBI) no 0.63
    17 Rru_A3282 hypothetical protein (NCBI) no 0.63
    18 Rru_A3548 Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) no 0.62
    19 Rru_A1675 Cytochrome c assembly protein (NCBI) no 0.62
    20 Rru_A0616 photosynthetic complex assembly protein (NCBI) no 0.62

    Or look for negative cofitness