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  • Top cofit genes for Rru_A1476 from Rhodospirillum rubrum S1H

    PhnA protein (NCBI)
    SEED: Alkylphosphonate utilization operon protein PhnA
    KEGG: phosphonoacetate hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2034 Phosphate transporter (NCBI) no 0.59
    2 Rru_A3542 malate dehydrogenase (NCBI) no 0.56
    3 Rru_A0999 hypothetical protein (NCBI) no 0.56
    4 Rru_A0367 NUDIX hydrolase (NCBI) no 0.54
    5 Rru_A2574 Transcriptional Regulator, BadM/Rrf2 family (NCBI) no 0.50
    6 Rru_A1284 Cytoplasmic chaperone TorD (NCBI) no 0.50
    7 Rru_A0239 hypothetical protein (NCBI) no 0.50
    8 Rru_A3575 Acetate--CoA ligase (NCBI) 0.63 0.50
    9 Rru_A0301 Alkylhydroperoxidase AhpD core (NCBI) no 0.50
    10 Rru_A2251 extracellular solute-binding protein, family 3 (NCBI) 0.23 0.49
    11 Rru_A0132 Peptidase S13, D-Ala-D-Ala carboxypeptidase C (NCBI) no 0.49
    12 Rru_A1353 hypothetical protein (NCBI) no 0.48
    13 Rru_A1295 extracellular solute-binding protein, family 3 (NCBI) no 0.47
    14 Rru_A3017 Short-chain dehydrogenase/reductase SDR (NCBI) 0.47 0.47
    15 Rru_A0427 Short-chain dehydrogenase/reductase SDR (NCBI) no 0.47
    16 Rru_A3450 Ribonuclease T2 (NCBI) no 0.47
    17 Rru_A1753 High-affinity nickel-transporter (NCBI) no 0.46
    18 Rru_A0426 hypothetical protein (NCBI) no 0.46
    19 Rru_A1244 hypothetical protein (NCBI) no 0.46
    20 Rru_A3200 Binding-protein-dependent transport systems inner membrane component (NCBI) no 0.46

    Or look for negative cofitness