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  • Top cofit genes for Rru_A1304 from Rhodospirillum rubrum S1H

    Urocanate hydratase (NCBI)
    SEED: Urocanate hydratase (EC 4.2.1.49)
    KEGG: urocanate hydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0309 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) no 0.62
    2 Rru_A0138 Leucyl aminopeptidase (NCBI) 0.80 0.61
    3 Rru_A2017 hypothetical protein (NCBI) no 0.61
    4 Rru_A0816 hypothetical protein (NCBI) no 0.59
    5 Rru_A1336 Periplasmic binding protein/LacI transcriptional regulator (NCBI) no 0.59
    6 Rru_A1350 Sodium/hydrogen exchanger (NCBI) no 0.58
    7 Rru_A1260 ABC transporter component (NCBI) no 0.57
    8 Rru_A0625 hypothetical protein (NCBI) no 0.57
    9 Rru_A1950 Transcriptional regulator, ModE family (NCBI) no 0.57
    10 Rru_A2177 Binding-protein-dependent transport systems inner membrane component (NCBI) no 0.57
    11 Rru_A3080 hypothetical protein (NCBI) no 0.56
    12 Rru_A2727 hypothetical protein (NCBI) 0.37 0.56
    13 Rru_A1049 GGDEF family protein (NCBI) no 0.56
    14 Rru_A2601 hypothetical protein (NCBI) no 0.55
    15 Rru_A3653 Protein of unknown function DUF214 (NCBI) 0.41 0.55
    16 Rru_A0450 Uncharacterized protein predicted to be involved in DNA repair-like (NCBI) no 0.55
    17 Rru_A1002 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) 0.65 0.55
    18 Rru_A0585 ABC transporter component (NCBI) no 0.54
    19 Rru_A2481 hypothetical protein (NCBI) no 0.54
    20 Rru_A1688 hypothetical protein (NCBI) 0.56 0.54

    Or look for negative cofitness