Top cofit genes for Rru_A1280 from Rhodospirillum rubrum S1H

HPr kinase (NCBI)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_B0018		Protein of unknown function DUF161 (NCBI)	no	0.56
2	Rru_A2185		Pyruvate ferredoxin/flavodoxin oxidoreductase (NCBI)	no	0.54
3	Rru_A0256		GCN5-related N-acetyltransferase (NCBI)	no	0.54
4	Rru_B0012		DNA polymerase, beta-like region (NCBI)	no	0.54
5	Rru_A2368		transcriptional regulator with PAS/PAC domain (NCBI)	no	0.53
6	Rru_A0387		Antibiotic biosynthesis monooxygenase (NCBI)	no	0.52
7	Rru_A1671		hypothetical protein (NCBI)	no	0.51
8	Rru_A3161		hypothetical protein (NCBI)	no	0.50
9	Rru_A1376		hypothetical protein (NCBI)	no	0.50
10	Rru_A3587		hypothetical protein (NCBI)	no	0.49
11	Rru_A2076		chemotaxis sensory transducer (NCBI)	no	0.49
12	Rru_A3024		Prolyl 4-hydroxylase, alpha subunit (NCBI)	no	0.47
13	Rru_A2233		transcriptional regulatory protein (NCBI)	no	0.46
14	Rru_A0254		NAD-dependent epimerase/dehydratase (NCBI)	no	0.45
15	Rru_A1654		Response regulator receiver domain protein (CheY) (NCBI)	no	0.45
16	Rru_A0094		Binding-protein-dependent transport systems inner membrane component (NCBI)	no	0.45
17	Rru_A0843		ABC transporter component (NCBI)	no	0.45
18	Rru_A0497		ABC transporter component (NCBI)	no	0.45
19	Rru_A3295		circadian clock protein KaiC (NCBI)	no	0.45
20	Rru_A1951		Transcriptional Regulator, AraC family (NCBI)	no	0.44

Or look for negative cofitness