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    • Top cofit genes for Rru_A1154 from Rhodospirillum rubrum S1H

    Protein of unknown function DUF48 (NCBI)
    SEED: CRISPR-associated protein Cas1

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2071 Methylmalonate-semialdehyde dehydrogenase (NCBI) no 0.70
    2 Rru_A0488 TonB-dependent receptor (NCBI) no 0.69
    3 Rru_A0966 Carbon-monoxide dehydrogenase (NCBI) no 0.69
    4 Rru_A0460 NADP oxidoreductase, coenzyme F420-dependent (NCBI) no 0.68
    5 Rru_A1355 Protein of unknown function DUF892 (NCBI) no 0.68
    6 Rru_A0087 HI0933-like protein (NCBI) no 0.68
    7 Rru_A2922 hypothetical protein (NCBI) no 0.66
    8 Rru_A0141 Porphobilinogen synthase (NCBI) no 0.66
    9 Rru_A3082 Predicted transcriptional regulator (NCBI) no 0.65
    10 Rru_A2923 hypothetical protein (NCBI) no 0.64
    11 Rru_A3022 hypothetical protein (NCBI) no 0.64
    12 Rru_A0839 Transcriptional Regulator, AraC family (NCBI) no 0.64
    13 Rru_A1925 regulatory protein GntR (NCBI) no 0.63
    14 Rru_A3520 Protein of unknown function UPF0118 (NCBI) no 0.63
    15 Rru_A3262 hypothetical protein (NCBI) no 0.63
    16 Rru_A0551 TPR domain protein (NCBI) no 0.63
    17 Rru_A2345 Glycosyl transferase, group 1 (NCBI) no 0.62
    18 Rru_A1160 chemotaxis sensory transducer (NCBI) no 0.62
    19 Rru_A3369 hypothetical protein (NCBI) no 0.62
    20 Rru_A1485 Parallel beta-helix repeat (NCBI) no 0.62

    Or look for negative cofitness