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  • Top cofit genes for Rru_A1131 from Rhodospirillum rubrum S1H

    Aminotransferase, class IV (NCBI)
    SEED: Aminodeoxychorismate lyase (EC 4.1.3.38)
    KEGG: branched-chain amino acid aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2185 Pyruvate ferredoxin/flavodoxin oxidoreductase (NCBI) no 0.65
    2 Rru_A3466 Ornithine aminotransferase (NCBI) no 0.63
    3 Rru_A1424 NADH dehydrogenase (ubiquinone), 30 kDa subunit (NCBI) no 0.61
    4 Rru_A0013 hypothetical protein (NCBI) no 0.60
    5 Rru_A0273 Acetoacetyl-CoA reductase (NCBI) no 0.59
    6 Rru_A2067 Acyltransferase 3 (NCBI) no 0.59
    7 Rru_A0030 hypothetical protein (NCBI) no 0.59
    8 Rru_A0197 hypothetical protein (NCBI) no 0.57
    9 Rru_A0254 NAD-dependent epimerase/dehydratase (NCBI) no 0.57
    10 Rru_A1177 chemotaxis sensory transducer (NCBI) no 0.56
    11 Rru_A1791 ABC-2 transporter component (NCBI) no 0.56
    12 Rru_A3418 Transcriptional Regulator, TetR family (NCBI) no 0.55
    13 Rru_A0720 Transcriptional Regulator, MarR family (NCBI) no 0.55
    14 Rru_A3484 Secretion protein HlyD (NCBI) no 0.55
    15 Rru_A0094 Binding-protein-dependent transport systems inner membrane component (NCBI) no 0.55
    16 Rru_A0481 hypothetical protein (NCBI) no 0.55
    17 Rru_A2856 putative flagellar protein FlaF (NCBI) no 0.54
    18 Rru_A1736 hypothetical protein (NCBI) no 0.54
    19 Rru_A0502 hypothetical protein (NCBI) no 0.54
    20 Rru_A0934 hypothetical protein (NCBI) no 0.54

    Or look for negative cofitness