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  • Top cofit genes for Rru_A1122 from Rhodospirillum rubrum S1H

    Beta-lactamase-like (NCBI)
    SEED: Outer membrane protein romA

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1449 Bile acid:sodium symporter (NCBI) no 0.51
    2 Rru_A0771 hypothetical protein (NCBI) no 0.51
    3 Rru_A3517 Major facilitator superfamily MFS_1 (NCBI) no 0.50
    4 Rru_A1152 hypothetical protein (NCBI) no 0.49
    5 Rru_A0989 Twin-arginine translocation pathway signal (NCBI) no 0.49
    6 Rru_A2302 Periplasmic binding protein/LacI transcriptional regulator (NCBI) no 0.48
    7 Rru_A0722 Sigma-24 (FecI) (NCBI) no 0.46
    8 Rru_A1951 Transcriptional Regulator, AraC family (NCBI) no 0.45
    9 Rru_A2097 hypothetical protein (NCBI) no 0.45
    10 Rru_A0463 Alanine racemase-like (NCBI) no 0.45
    11 Rru_A2277 Nickel ABC transporter, periplasmic nickel-binding (NCBI) no 0.44
    12 Rru_A3489 hypothetical protein (NCBI) no 0.44
    13 Rru_A2742 O-linked N-acetylglucosamine transferase SPINDLY family-like (NCBI) no 0.44
    14 Rru_A3171 hypothetical protein (NCBI) no 0.44
    15 Rru_A0475 NADH:flavin oxidoreductase/NADH oxidase (NCBI) no 0.44
    16 Rru_A2506 Enoyl-CoA hydratase/isomerase (NCBI) no 0.43
    17 Rru_A1917 extracellular solute-binding protein, family 5 (NCBI) no 0.43
    18 Rru_A0805 conjugal transfer protein (NCBI) no 0.43
    19 Rru_A1957 ExsB (NCBI) 0.35 0.42
    20 Rru_A3509 AMP-dependent synthetase and ligase (NCBI) no 0.42

    Or look for negative cofitness