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Cofit
Protein
Homologs
Top cofit genes for Rru_A1122 from
Rhodospirillum rubrum S1H
Beta-lactamase-like (NCBI)
SEED: Outer membrane protein romA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A1449
Bile acid:sodium symporter (NCBI)
no
0.51
2
Rru
_A0771
hypothetical protein (NCBI)
no
0.51
3
Rru
_A3517
Major facilitator superfamily MFS_1 (NCBI)
no
0.50
4
Rru
_A1152
hypothetical protein (NCBI)
no
0.49
5
Rru
_A0989
Twin-arginine translocation pathway signal (NCBI)
no
0.49
6
Rru
_A2302
Periplasmic binding protein/LacI transcriptional regulator (NCBI)
no
0.48
7
Rru
_A0722
Sigma-24 (FecI) (NCBI)
no
0.46
8
Rru
_A1951
Transcriptional Regulator, AraC family (NCBI)
no
0.45
9
Rru
_A2097
hypothetical protein (NCBI)
no
0.45
10
Rru
_A0463
Alanine racemase-like (NCBI)
no
0.45
11
Rru
_A2277
Nickel ABC transporter, periplasmic nickel-binding (NCBI)
no
0.44
12
Rru
_A3489
hypothetical protein (NCBI)
no
0.44
13
Rru
_A2742
O-linked N-acetylglucosamine transferase SPINDLY family-like (NCBI)
no
0.44
14
Rru
_A3171
hypothetical protein (NCBI)
no
0.44
15
Rru
_A0475
NADH:flavin oxidoreductase/NADH oxidase (NCBI)
no
0.44
16
Rru
_A2506
Enoyl-CoA hydratase/isomerase (NCBI)
no
0.43
17
Rru
_A1917
extracellular solute-binding protein, family 5 (NCBI)
no
0.43
18
Rru
_A0805
conjugal transfer protein (NCBI)
no
0.43
19
Rru
_A1957
ExsB (NCBI)
0.35
0.42
20
Rru
_A3509
AMP-dependent synthetase and ligase (NCBI)
no
0.42
Or look for
negative cofitness