Top cofit genes for Rru_A1049 from Rhodospirillum rubrum S1H

GGDEF family protein (NCBI)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A0813		no description	no	0.70
2	Rru_A3285		Response regulator receiver domain protein (CheY) (NCBI)	no	0.64
3	Rru_A0270		Protein of unknown function DUF525 (NCBI)	no	0.62
4	Rru_A2252		Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI)	no	0.61
5	Rru_A3396		Autoinducer synthesis protein (NCBI)	no	0.60
6	Rru_A1642		putative sulfonate/nitrate transport system substrate-binding protein (NCBI)	no	0.60
7	Rru_A3194		SMF protein (NCBI)	no	0.59
8	Rru_B0024		RepA-related protein (NCBI)	no	0.58
9	Rru_A1309		acetoacetyl-CoA reductase (NCBI)	no	0.57
10	Rru_A2440		NADH:ubiquinone oxidoreductase 17.2 kD subunit (NCBI)	no	0.57
11	Rru_A0741		Signal Transduction Histidine Kinase (NCBI)	no	0.57
12	Rru_A2363		Endonuclease/exonuclease/phosphatase (NCBI)	no	0.57
13	Rru_A3539		GlnB (protein PII) uridylyltransferase, GlnD (NCBI)	no	0.57
14	Rru_A0398		Thiol-disulfide isomerase and thioredoxins-like (NCBI)	no	0.56
15	Rru_A2983		Polyprenyl synthetase (NCBI)	no	0.56
16	Rru_A1439		Putative FecR (NCBI)	no	0.56
17	Rru_A1534		Cl- channel, voltage gated (NCBI)	no	0.56
18	Rru_A0560		Cytochrome bd ubiquinol oxidase, subunit I (NCBI)	no	0.56
19	Rru_A3009		Aminotransferase class-III (NCBI)	no	0.56
20	Rru_A1525		Nucleoside diphosphate pyrophosphatase (NCBI)	no	0.56

Or look for negative cofitness