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  • Top cofit genes for Rru_A1021 from Rhodospirillum rubrum S1H

    Sigma 32 (RpoH) (NCBI)
    SEED: RNA polymerase sigma factor RpoH
    KEGG: RNA polymerase sigma-32 factor

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1366 Transcriptional Regulator, DeoR family (NCBI) no 0.85
    2 Rru_A1849 Recombination protein O, RecO (NCBI) no 0.83
    3 Rru_A0574 Carboxylyase-related protein (NCBI) no 0.81
    4 Rru_A1620 hypothetical protein (NCBI) no 0.79
    5 Rru_A3168 Binding-protein-dependent transport systems inner membrane component (NCBI) no 0.79
    6 Rru_A1677 Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) no 0.78
    7 Rru_A0637 hypothetical protein (NCBI) no 0.78
    8 Rru_A3169 ABC transporter component (NCBI) no 0.75
    9 Rru_A1837 Porphobilinogen synthase (NCBI) no 0.74
    10 Rru_A3739 hypothetical protein (NCBI) no 0.74
    11 Rru_A0770 Peptidase M23B (NCBI) no 0.74
    12 Rru_A3166 extracellular solute-binding protein, family 5 (NCBI) no 0.72
    13 Rru_A3366 Cobaltochelatase, CobN subunit (NCBI) no 0.72
    14 Rru_A0260 Protein of unknown function DUF466 (NCBI) no 0.72
    15 Rru_A1105 tRNA synthetase, class II (G, H, P and S) (NCBI) no 0.72
    16 Rru_A2992 Precorrin-6Y C5,15-methyltransferase (decarboxylating) (NCBI) no 0.72
    17 Rru_A1890 hypothetical protein (NCBI) no 0.71
    18 Rru_A3627 Cobyrinic acid a,c-diamide synthase (NCBI) no 0.71
    19 Rru_A3558 Protein of unknown function UPF0005 (NCBI) no 0.71
    20 Rru_A2399 conserved hypothetical protein VC1941 (NCBI) no 0.71

    Or look for negative cofitness