Top cofit genes for Rru_A1004 from Rhodospirillum rubrum S1H

Lysine-arginine-ornithine-binding periplasmic protein (NCBI)
SEED: Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4)
KEGG: general L-amino acid transport system substrate-binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A3063		Crotonyl-CoA reductase (NCBI)	no	0.70
2	Rru_A2089		Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI)	0.82	0.68
3	Rru_A2897		Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI)	no	0.63
4	Rru_A1003		Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI)	0.99	0.60
5	Rru_A3537		Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI)	no	0.58
6	Rru_A2727		hypothetical protein (NCBI)	no	0.58
7	Rru_A0223		Protein of unknown function DUF344 (NCBI)	0.25	0.58
8	Rru_A0795		Nitrogenase iron protein (NCBI)	no	0.58
9	Rru_A2088		Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI)	0.84	0.57
10	Rru_A0406		DNA repair protein RadA (NCBI)	no	0.57
11	Rru_A2492		Glycosyl transferase, group 1 (NCBI)	no	0.57
12	Rru_A3532		UspA (NCBI)	no	0.56
13	Rru_A2354		adenylate cyclase (NCBI)	no	0.56
14	Rru_A2890		hypothetical protein (NCBI)	no	0.56
15	Rru_A2025		Transcriptional activator, TenA family (NCBI)	no	0.56
16	Rru_A0021		Transcriptional Regulator, MarR family (NCBI)	no	0.55
17	Rru_A3055		Protein of unknown function DUF6, transmembrane (NCBI)	no	0.55
18	Rru_A2770		Uncharacterized conserved protein UCP032146 (NCBI)	0.27	0.54
19	Rru_A0250		Xylulokinase (NCBI)	no	0.54
20	Rru_A0655		Transcriptional Regulator, AsnC family (NCBI)	0.67	0.54

Or look for negative cofitness