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    • Top cofit genes for Rru_A0902 from Rhodospirillum rubrum S1H

    Peptidase C56, PfpI (NCBI)
    SEED: ThiJ/PfpI family protein
    KEGG: protease I

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A2873 Extracellular ligand-binding receptor (NCBI) no 0.67
    2 Rru_A0273 Acetoacetyl-CoA reductase (NCBI) no 0.66
    3 Rru_A3000 Formate acetyltransferase (NCBI) no 0.65
    4 Rru_A0314 NADH dehydrogenase (quinone) (NCBI) no 0.63
    5 Rru_A0664 Signal Transduction Histidine Kinase (NCBI) no 0.63
    6 Rru_A3693 Protein of unknown function UPF0011 (NCBI) no 0.59
    7 Rru_A0960 AmpD (negative regulator of AmpC) (NCBI) no 0.58
    8 Rru_A1548 Malonyl-CoA decarboxylase (NCBI) no 0.58
    9 Rru_A3203 ribonuclease R (NCBI) no 0.58
    10 Rru_A2375 hypothetical protein (NCBI) no 0.58
    11 Rru_A1491 hypothetical protein (NCBI) no 0.56
    12 Rru_A3360 Electron transport protein SCO1/SenC (NCBI) no 0.56
    13 Rru_A1385 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) no 0.55
    14 Rru_A1985 hypothetical protein (NCBI) no 0.55
    15 Rru_A1027 (Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (NCBI) no 0.53
    16 Rru_A2999 Radical SAM (NCBI) no 0.53
    17 Rru_A0666 Multi-sensor Signal Transduction Histidine Kinase (NCBI) no 0.52
    18 Rru_A3023 hypothetical protein (NCBI) no 0.52
    19 Rru_A1219 Sigma54 Specific Transcriptional Regulator containing PAS, and Fis DNA-binding domains (NCBI) no 0.52
    20 Rru_A2606 Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) no 0.52

    Or look for negative cofitness