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  • Top cofit genes for Rru_A0801 from Rhodospirillum rubrum S1H

    Binding-protein-dependent transport systems inner membrane component (NCBI)
    SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0867 Peptidase C14, caspase catalytic subunit p20 (NCBI) no 0.74
    2 Rru_A0025 hypothetical protein (NCBI) no 0.72
    3 Rru_A1468 Phosphate butyryltransferase (NCBI) no 0.72
    4 Rru_A2228 Putative diguanylate cyclase (GGDEF domain) (NCBI) no 0.69
    5 Rru_A3123 esterase/lipase/thioesterase family active site (NCBI) no 0.68
    6 Rru_A2750 Secretion protein HlyD (NCBI) no 0.68
    7 Rru_A2502 Protein of unknown function DUF454 (NCBI) no 0.67
    8 Rru_A2527 hypothetical protein (NCBI) no 0.67
    9 Rru_A0401 hypothetical protein (NCBI) no 0.66
    10 Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) no 0.65
    11 Rru_A0488 TonB-dependent receptor (NCBI) no 0.65
    12 Rru_A0251 Transcriptional Regulator, AraC family (NCBI) no 0.65
    13 Rru_A0697 Multi antimicrobial extrusion protein MatE (NCBI) no 0.65
    14 Rru_A0677 hypothetical protein (NCBI) no 0.64
    15 Rru_A2480 Methylmalonyl-CoA mutase (NCBI) no 0.64
    16 Rru_A3729 Creatininase (NCBI) 0.23 0.64
    17 Rru_A1117 Secretion protein HlyD (NCBI) no 0.63
    18 Rru_A3659 hypothetical protein (NCBI) no 0.63
    19 Rru_A3528 hypothetical protein (NCBI) no 0.63
    20 Rru_A0971 hypothetical protein (NCBI) no 0.63

    Or look for negative cofitness