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  • Top cofit genes for Rru_A0778 from Rhodospirillum rubrum S1H

    Lipoprotein YaeC (NCBI)
    SEED: Methionine ABC transporter substrate-binding protein
    KEGG: D-methionine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1603 PhoH-like protein (NCBI) no 0.57
    2 Rru_A2248 hypothetical protein (NCBI) no 0.57
    3 Rru_A2925 Major facilitator superfamily MFS_1 (NCBI) no 0.57
    4 Rru_A3381 Cobyric acid synthase CobQ (NCBI) no 0.56
    5 Rru_A3001 Carbon starvation protein CstA (NCBI) no 0.55
    6 Rru_A0348 CRISPR-associated protein, Cas2 (NCBI) no 0.55
    7 Rru_A2322 CheW protein (NCBI) no 0.54
    8 Rru_A3189 hypothetical protein (NCBI) no 0.54
    9 Rru_A0780 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.21 0.52
    10 Rru_A1133 Excinuclease ABC, B subunit (NCBI) no 0.52
    11 Rru_A3687 Cobalt transport protein (NCBI) no 0.52
    12 Rru_A1199 Pyridoxal kinase (NCBI) no 0.51
    13 Rru_A1635 NADH dehydrogenase (quinone) (NCBI) no 0.51
    14 Rru_A1636 NADH-ubiquinone oxidoreductase, chain 4L (NCBI) no 0.50
    15 Rru_A3748 hypothetical protein (NCBI) no 0.49
    16 Rru_A3704 Periplasmic solute binding protein (NCBI) no 0.49
    17 Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) no 0.48
    18 Rru_A1936 ErfK/YbiS/YcfS/YnhG (NCBI) no 0.48
    19 Rru_A0554 Rh-like protein/ammonium transporter (NCBI) no 0.48
    20 Rru_A1438 Sigma-24 (FecI) (NCBI) no 0.48

    Or look for negative cofitness