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  • Top cofit genes for Rru_A0569 from Rhodospirillum rubrum S1H

    Chorismate mutase (NCBI)
    SEED: Isochorismate pyruvate-lyase (EC 4.-.-.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1798 Type I secretion outer membrane protein, TolC (NCBI) 0.54 0.72
    2 Rru_A2970 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (NCBI) no 0.70
    3 Rru_A1275 hypothetical protein (NCBI) no 0.67
    4 Rru_A1675 Cytochrome c assembly protein (NCBI) no 0.63
    5 Rru_A3700 Secretion protein HlyD (NCBI) no 0.62
    6 Rru_A2972 Peptidase M16-like (NCBI) no 0.62
    7 Rru_A1015 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.14 0.61
    8 Rru_A1695 Protein of unknown function DUF411 (NCBI) no 0.61
    9 Rru_A3699 Acriflavin resistance protein (NCBI) no 0.60
    10 Rru_A2192 Peptidase M3B, oligoendopeptidase-related clade 3 (NCBI) no 0.59
    11 Rru_A1883 Magnesium and cobalt transport protein CorA (NCBI) no 0.59
    12 Rru_A0644 hypothetical protein (NCBI) no 0.57
    13 Rru_A2750 Secretion protein HlyD (NCBI) no 0.57
    14 Rru_A0032 TPR repeat (NCBI) no 0.56
    15 Rru_A1322 alpha subunit of malonate decarboxylase (NCBI) no 0.56
    16 Rru_A3492 Periplasmic Sensor Hybrid Histidine Kinase (NCBI) no 0.56
    17 Rru_A1693 Orn/DAP/Arg decarboxylase 2 (NCBI) no 0.56
    18 Rru_A3052 hypothetical protein (NCBI) no 0.56
    19 Rru_A1018 extracellular solute-binding protein, family 1 (NCBI) 0.14 0.55
    20 Rru_A3354 Protein of unknown function DUF45 (NCBI) no 0.55

    Or look for negative cofitness