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  • Top cofit genes for Rru_A0567 from Rhodospirillum rubrum S1H

    Peptidase U62, modulator of DNA gyrase (NCBI)
    SEED: TldD protein, part of TldE/TldD proteolytic complex
    KEGG: TldD protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0575 Peptidase U62, modulator of DNA gyrase (NCBI) 0.96 0.64
    2 Rru_A0246 Ppx/GppA phosphatase (NCBI) no 0.64
    3 Rru_A3189 hypothetical protein (NCBI) no 0.62
    4 Rru_A2619 Deoxyxylulose-5-phosphate synthase (NCBI) no 0.62
    5 Rru_A2035 phosphate binding protein, putative (NCBI) no 0.60
    6 Rru_A3102 sugar transferase (NCBI) no 0.56
    7 Rru_A0602 Phosphate uptake regulator, PhoU (NCBI) 0.62 0.56
    8 Rru_A0571 hypothetical protein (NCBI) 0.63 0.56
    9 Rru_A3090 Glycosyl transferase, family 2 (NCBI) no 0.56
    10 Rru_A2620 Hemolysin A (NCBI) 0.60 0.54
    11 Rru_A3155 hypothetical protein (NCBI) no 0.54
    12 Rru_A0925 Glycosyl transferase, group 1 (NCBI) no 0.54
    13 Rru_A0406 DNA repair protein RadA (NCBI) 0.66 0.54
    14 Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) 0.68 0.54
    15 Rru_A1803 Undecaprenol kinase (NCBI) 0.90 0.53
    16 Rru_A0143 GCN5-related N-acetyltransferase (NCBI) no 0.53
    17 Rru_A0458 hypothetical protein (NCBI) no 0.53
    18 Rru_A2004 Transcriptional Regulator, LysR family (NCBI) no 0.53
    19 Rru_A1438 Sigma-24 (FecI) (NCBI) 0.53 0.53
    20 Rru_A0348 CRISPR-associated protein, Cas2 (NCBI) no 0.53

    Or look for negative cofitness