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    • Top cofit genes for Rru_A0558 from Rhodospirillum rubrum S1H

    Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI)
    SEED: Sensory box/GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0672 hypothetical protein (NCBI) no 0.61
    2 Rru_A2921 TPR repeat (NCBI) no 0.59
    3 Rru_A3234 processing peptidase (NCBI) no 0.58
    4 Rru_A2756 hypothetical protein (NCBI) no 0.56
    5 Rru_A1402 CheW protein (NCBI) no 0.55
    6 Rru_A0223 Protein of unknown function DUF344 (NCBI) no 0.54
    7 Rru_A1282 Two component Transcriptional regulator, Winged helix family (NCBI) no 0.54
    8 Rru_A3490 Metallophosphoesterase (NCBI) no 0.54
    9 Rru_A2159 Creatininase (NCBI) no 0.53
    10 Rru_A2300 inner-membrane translocator (NCBI) no 0.52
    11 Rru_A0156 Secretion protein HlyD (NCBI) no 0.51
    12 Rru_A1537 hypothetical protein (NCBI) no 0.50
    13 Rru_A3015 Twin-arginine translocation pathway signal (NCBI) no 0.50
    14 Rru_A3749 hypothetical protein (NCBI) no 0.50
    15 Rru_A2790 Transcriptional Regulator, MarR family (NCBI) no 0.50
    16 Rru_A2735 hypothetical protein (NCBI) no 0.49
    17 Rru_A3642 Negative regulator of class I heat shock protein (NCBI) no 0.49
    18 Rru_A0358 Heme oxygenase (NCBI) no 0.49
    19 Rru_A0765 hypothetical protein (NCBI) no 0.48
    20 Rru_A0655 Transcriptional Regulator, AsnC family (NCBI) no 0.48

    Or look for negative cofitness