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  • Top cofit genes for Rru_A0550 from Rhodospirillum rubrum S1H

    TPR repeat (NCBI)
    SEED: FOG: TPR repeat

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A0535 Protein of unknown function DUF6, transmembrane (NCBI) no 0.67
    2 Rru_A3551 Aldo/keto reductase (NCBI) no 0.60
    3 Rru_A1629 hypothetical protein (NCBI) no 0.59
    4 Rru_A0906 polyhedral shell protein, EutL/PduB type (NCBI) no 0.59
    5 Rru_A1363 inner-membrane translocator (NCBI) no 0.59
    6 Rru_A3070 Transcriptional Regulator, AsnC family (NCBI) no 0.58
    7 Rru_A2775 Dienelactone hydrolase (NCBI) no 0.58
    8 Rru_A1840 Penicillin amidase (NCBI) no 0.57
    9 Rru_A2445 Protein of unknown function DUF140 (NCBI) no 0.57
    10 Rru_A3760 regulatory protein GntR (NCBI) no 0.57
    11 Rru_A2833 hypothetical protein (NCBI) no 0.54
    12 Rru_A3484 Secretion protein HlyD (NCBI) no 0.54
    13 Rru_A1500 Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) no 0.53
    14 Rru_A1791 ABC-2 transporter component (NCBI) no 0.53
    15 Rru_A2380 Major facilitator superfamily MFS_1 (NCBI) no 0.53
    16 Rru_A2272 TspO and MBR related proteins (NCBI) no 0.52
    17 Rru_A0638 hypothetical protein (NCBI) no 0.52
    18 Rru_A3118 Lipopolysaccharide biosynthesis (NCBI) no 0.51
    19 Rru_A1253 Glutamine synthetase, catalytic region (NCBI) no 0.51
    20 Rru_A2766 Protein of unknown function DUF329 (NCBI) no 0.50

    Or look for negative cofitness