Top cofit genes for Rru_A0547 from Rhodospirillum rubrum S1H

Flagellar hook capping protein (NCBI)
SEED: Flagellar basal-body rod modification protein FlgD
KEGG: flagellar basal-body rod modification protein FlgD

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A3627		Cobyrinic acid a,c-diamide synthase (NCBI)	no	0.64
2	Rru_A2578		hypothetical protein (NCBI)	no	0.64
3	Rru_A0096		Secretion protein HlyD (NCBI)	no	0.62
4	Rru_A0999		hypothetical protein (NCBI)	no	0.61
5	Rru_A3486		Protein of unknown function UPF0016 (NCBI)	no	0.61
6	Rru_A1170		Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI)	no	0.59
7	Rru_A3154		hypothetical protein (NCBI)	no	0.59
8	Rru_A1085		Metallophosphoesterase (NCBI)	no	0.59
9	Rru_A2119		Molybdopterin oxidoreductase (NCBI)	no	0.58
10	Rru_A1236		Iojap-related protein (NCBI)	no	0.58
11	Rru_A2734		dTDP-4-dehydrorhamnose reductase (NCBI)	no	0.58
12	Rru_A3383		Cobalamin (vitamin B12) biosynthesis CbiG protein (NCBI)	no	0.57
13	Rru_A1763		SecF protein (NCBI)	no	0.56
14	Rru_A0896		hypothetical protein (NCBI)	no	0.56
15	Rru_A0426		hypothetical protein (NCBI)	no	0.56
16	Rru_A2208		hypothetical protein (NCBI)	no	0.55
17	Rru_A1338		inner-membrane translocator (NCBI)	no	0.55
18	Rru_A0438		Multi-sensor Signal Transduction Histidine Kinase (NCBI)	no	0.55
19	Rru_A1981		Succinylglutamate desuccinylase/aspartoacylase (NCBI)	no	0.55
20	Rru_A0807		Conjugal transfer protein TrbC (NCBI)	no	0.54

Or look for negative cofitness