Top cofit genes for Rru_A0541 from Rhodospirillum rubrum S1H

MotA/TolQ/ExbB proton channel (NCBI)
SEED: Flagellar motor rotation protein MotA
KEGG: chemotaxis protein MotA

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A1973		Transcriptional Regulator, LacI family (NCBI)	no	0.46
2	Rru_A3743		hypothetical protein (NCBI)	no	0.45
3	Rru_A0936		hypothetical protein (NCBI)	no	0.45
4	Rru_A3076		Cobalamin adenosyltransferase (NCBI)	no	0.44
5	Rru_A2946		DNA mismatch repair protein (NCBI)	no	0.43
6	Rru_A2934		Putative diguanylate phosphodiesterase (EAL domain) (NCBI)	no	0.42
7	Rru_A1904		inner-membrane translocator (NCBI)	no	0.42
8	Rru_A2255		Uracil phosphoribosyl transferase (NCBI)	no	0.42
9	Rru_A0702		Molybdate ABC transporter, ATP-binding protein (NCBI)	no	0.42
10	Rru_A3661		Major facilitator superfamily MFS_1 (NCBI)	no	0.41
11	Rru_A1162		Nickel-dependent hydrogenase, large subunit (NCBI)	no	0.40
12	Rru_A3697		Fumarylacetoacetate (FAA) hydrolase (NCBI)	no	0.40
13	Rru_A2247		hypothetical protein (NCBI)	no	0.40
14	Rru_A2235		Multi-sensor Signal Transduction Histidine Kinase (NCBI)	no	0.39
15	Rru_A0379		Flavodoxin, long chain (NCBI)	no	0.39
16	Rru_A0661		Hly-III related proteins (NCBI)	no	0.39
17	Rru_A1235		Protein of unknown function DUF163 (NCBI)	no	0.38
18	Rru_A1900		Transcriptional Regulator, AsnC family (NCBI)	no	0.38
19	Rru_A2287		Protein of unknown function DUF86 (NCBI)	no	0.38
20	Rru_A1785		membrane protein-like (NCBI)	no	0.38

Or look for negative cofitness