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  • Top cofit genes for Rru_A0506 from Rhodospirillum rubrum S1H

    Glycoside hydrolase (NCBI)
    SEED: Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)
    KEGG: 1,4-alpha-glucan branching enzyme

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3211 Hemerythrin HHE cation binding region (NCBI) no 0.66
    2 Rru_A2347 hypothetical protein (NCBI) no 0.64
    3 Rru_A2302 Periplasmic binding protein/LacI transcriptional regulator (NCBI) no 0.62
    4 Rru_B0046 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (NCBI) 0.42 0.62
    5 Rru_A0474 Zinc-containing alcohol dehydrogenase superfamily (NCBI) 0.36 0.61
    6 Rru_A2536 hypothetical protein (NCBI) no 0.59
    7 Rru_A2729 hypothetical protein (NCBI) no 0.59
    8 Rru_A2344 hypothetical protein (NCBI) no 0.57
    9 Rru_A2324 PBS lyase HEAT-like repeat (NCBI) no 0.57
    10 Rru_A2639 hypothetical protein (NCBI) no 0.56
    11 Rru_A2351 Macrocin-O-methyltransferase (NCBI) no 0.56
    12 Rru_A1273 Alpha/beta hydrolase fold (NCBI) no 0.56
    13 Rru_A2277 Nickel ABC transporter, periplasmic nickel-binding (NCBI) no 0.55
    14 Rru_A2734 dTDP-4-dehydrorhamnose reductase (NCBI) no 0.55
    15 Rru_A2715 Acyltransferase 3 (NCBI) no 0.55
    16 Rru_A3314 Uncharacterized phage-encoded protein-like (NCBI) no 0.55
    17 Rru_A0463 Alanine racemase-like (NCBI) no 0.55
    18 Rru_A2637 hypothetical protein (NCBI) no 0.54
    19 Rru_A3204 C-terminal processing peptidase (NCBI) no 0.54
    20 Rru_A3675 Glutathione S-transferase-like (NCBI) no 0.54

    Or look for negative cofitness