• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs

    • Top cofit genes for Rru_A0488 from Rhodospirillum rubrum S1H

    TonB-dependent receptor (NCBI)
    SEED: FIG00505639: hypothetical protein
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3082 Predicted transcriptional regulator (NCBI) no 0.80
    2 Rru_A1355 Protein of unknown function DUF892 (NCBI) no 0.80
    3 Rru_A0867 Peptidase C14, caspase catalytic subunit p20 (NCBI) no 0.78
    4 Rru_A3669 Uncharacterized protein UPF0114 (NCBI) no 0.77
    5 Rru_A0286 hypothetical protein (NCBI) no 0.77
    6 Rru_A1047 6-phosphofructokinase (NCBI) 0.40 0.77
    7 Rru_A2527 hypothetical protein (NCBI) no 0.76
    8 Rru_A3253 MJ0042 finger-like region (NCBI) no 0.76
    9 Rru_A1538 hypothetical protein (NCBI) no 0.76
    10 Rru_A2228 Putative diguanylate cyclase (GGDEF domain) (NCBI) no 0.76
    11 Rru_A3201 ABC transporter component (NCBI) no 0.75
    12 Rru_A1493 UDP-N-acetylglucosamine 2-epimerase (NCBI) 0.86 0.74
    13 Rru_A0610 hypothetical protein (NCBI) no 0.74
    14 Rru_A2136 hypothetical protein (NCBI) no 0.73
    15 Rru_A3094 O-antigen polymerase (NCBI) no 0.73
    16 Rru_A0607 Adenine phosphoribosyl transferase (NCBI) 0.23 0.73
    17 Rru_A2923 hypothetical protein (NCBI) no 0.72
    18 Rru_A1133 Excinuclease ABC, B subunit (NCBI) 0.74 0.72
    19 Rru_A2409 GlpX (NCBI) no 0.72
    20 Rru_A0259 Carbon starvation protein CstA (NCBI) no 0.72

    Or look for negative cofitness