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  • Top cofit genes for Rru_A0479 from Rhodospirillum rubrum S1H

    Radical SAM (NCBI)
    SEED: moaA/nifB/pqqE family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3296 PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) no 0.66
    2 Rru_A1736 hypothetical protein (NCBI) no 0.60
    3 Rru_A0523 Two component CheB methylesterase (NCBI) no 0.57
    4 Rru_A3418 Transcriptional Regulator, TetR family (NCBI) no 0.57
    5 Rru_A0502 hypothetical protein (NCBI) no 0.56
    6 Rru_A3737 KAP P-loop (NCBI) no 0.54
    7 Rru_A0545 Flagellar FliF M-ring protein (NCBI) no 0.54
    8 Rru_A3718 hypothetical protein (NCBI) no 0.54
    9 Rru_A0632 chemotaxis sensory transducer (NCBI) no 0.53
    10 Rru_A0524 MCP methyltransferase, CheR-type (NCBI) no 0.53
    11 Rru_A1131 Aminotransferase, class IV (NCBI) no 0.52
    12 Rru_A1791 ABC-2 transporter component (NCBI) no 0.52
    13 Rru_A0120 chemotaxis sensory transducer (NCBI) no 0.52
    14 Rru_A2762 hypothetical protein (NCBI) no 0.51
    15 Rru_A1725 Carbonate dehydratase (NCBI) no 0.51
    16 Rru_A0843 ABC transporter component (NCBI) no 0.50
    17 Rru_A1951 Transcriptional Regulator, AraC family (NCBI) no 0.49
    18 Rru_A3756 PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) no 0.49
    19 Rru_A2653 hypothetical protein (NCBI) no 0.49
    20 Rru_A3314 Uncharacterized phage-encoded protein-like (NCBI) no 0.49

    Or look for negative cofitness