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Cofit
Protein
Homologs
Top cofit genes for Rru_A0479 from
Rhodospirillum rubrum S1H
Radical SAM (NCBI)
SEED: moaA/nifB/pqqE family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A3296
PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI)
no
0.66
2
Rru
_A1736
hypothetical protein (NCBI)
no
0.60
3
Rru
_A0523
Two component CheB methylesterase (NCBI)
no
0.57
4
Rru
_A3418
Transcriptional Regulator, TetR family (NCBI)
no
0.57
5
Rru
_A0502
hypothetical protein (NCBI)
no
0.56
6
Rru
_A3737
KAP P-loop (NCBI)
no
0.54
7
Rru
_A0545
Flagellar FliF M-ring protein (NCBI)
no
0.54
8
Rru
_A3718
hypothetical protein (NCBI)
no
0.54
9
Rru
_A0632
chemotaxis sensory transducer (NCBI)
no
0.53
10
Rru
_A0524
MCP methyltransferase, CheR-type (NCBI)
no
0.53
11
Rru
_A1131
Aminotransferase, class IV (NCBI)
no
0.52
12
Rru
_A1791
ABC-2 transporter component (NCBI)
no
0.52
13
Rru
_A0120
chemotaxis sensory transducer (NCBI)
no
0.52
14
Rru
_A2762
hypothetical protein (NCBI)
no
0.51
15
Rru
_A1725
Carbonate dehydratase (NCBI)
no
0.51
16
Rru
_A0843
ABC transporter component (NCBI)
no
0.50
17
Rru
_A1951
Transcriptional Regulator, AraC family (NCBI)
no
0.49
18
Rru
_A3756
PAS/PAC Sensor Hybrid Histidine Kinase (NCBI)
no
0.49
19
Rru
_A2653
hypothetical protein (NCBI)
no
0.49
20
Rru
_A3314
Uncharacterized phage-encoded protein-like (NCBI)
no
0.49
Or look for
negative cofitness