Top cofit genes for Rru_A0347 from Rhodospirillum rubrum S1H

Protein of unknown function DUF48 (NCBI)
SEED: CRISPR-associated protein Cas1

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rru_A0341		hypothetical protein (NCBI)	no	0.67
2	Rru_A0259		Carbon starvation protein CstA (NCBI)	no	0.67
3	Rru_A0822		hypothetical protein (NCBI)	no	0.67
4	Rru_A2214		Transcriptional Regulator, LysR family (NCBI)	no	0.67
5	Rru_A3344		Transcriptional Regulator, XRE family (NCBI)	no	0.66
6	Rru_A2630		ROK (NCBI)	no	0.65
7	Rru_A0496		Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI)	no	0.64
8	Rru_A0825		putative transposase (NCBI)	no	0.64
9	Rru_A2064		FAD dependent oxidoreductase (NCBI)	no	0.64
10	Rru_A1130		Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI)	no	0.64
11	Rru_A2480		Methylmalonyl-CoA mutase (NCBI)	no	0.64
12	Rru_A0401		hypothetical protein (NCBI)	no	0.63
13	Rru_A0864		ABC transporter, transmembrane region (NCBI)	no	0.62
14	Rru_A1468		Phosphate butyryltransferase (NCBI)	no	0.62
15	Rru_A1709		PilT protein-like (NCBI)	no	0.62
16	Rru_A1406		Two component CheB methylesterase (NCBI)	no	0.62
17	Rru_A2849		Flagellar P-ring protein (NCBI)	no	0.62
18	Rru_A1478		HPr kinase (NCBI)	no	0.62
19	Rru_A1868		Peptidase M23B (NCBI)	no	0.62
20	Rru_A3123		esterase/lipase/thioesterase family active site (NCBI)	no	0.62

Or look for negative cofitness