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  • Top cofit genes for Rru_A0217 from Rhodospirillum rubrum S1H

    Citrate lyase (NCBI)
    SEED: Malyl-CoA lyase (EC 4.1.3.24)
    KEGG: malyl-CoA lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1201 MaoC-like dehydratase (NCBI) 0.91 0.98
    2 Rru_A1200 Citrate lyase (NCBI) 0.74 0.92
    3 Rru_A3064 Isovaleryl-CoA dehydrogenase (NCBI) 0.87 0.90
    4 Rru_A2398 Pyruvate-ferredoxin (flavodoxin) oxidoreductase (NCBI) no 0.89
    5 Rru_A3062 Methylmalonyl-CoA mutase-like (NCBI) 0.70 0.83
    6 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) no 0.80
    7 Rru_A3445 Phosphoenolpyruvate-protein phosphotransferase (NCBI) no 0.79
    8 Rru_A2616 Histone deacetylase superfamily (NCBI) no 0.76
    9 Rru_A2088 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) no 0.69
    10 Rru_A2462 Enzymatic protein of unknown function (NCBI) no 0.66
    11 Rru_A3203 ribonuclease R (NCBI) no 0.66
    12 Rru_A2426 LrgA (NCBI) no 0.65
    13 Rru_A2413 Poly(R)-hydroxyalkanoic acid synthase, class I (NCBI) 0.49 0.64
    14 Rru_A2094 Acriflavin resistance protein (NCBI) no 0.64
    15 Rru_A3462 Cold-shock DNA-binding domain protein (NCBI) no 0.63
    16 Rru_A3605 Iron-sulfur cluster binding protein (NCBI) 0.39 0.63
    17 Rru_A2354 adenylate cyclase (NCBI) no 0.61
    18 Rru_A3395 Transcriptional Regulator, LuxR family (NCBI) no 0.59
    19 Rru_A3011 Isochorismatase hydrolase (NCBI) no 0.59
    20 Rru_A1121 Pyruvate carboxylase (NCBI) no 0.57

    Or look for negative cofitness