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    • Top cofit genes for Rru_A0179 from Rhodospirillum rubrum S1H

    Protein of unknown function DUF83 (NCBI)
    SEED: CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A3494 Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation (NCBI) no 0.63
    2 Rru_A0509 hypothetical protein (NCBI) no 0.59
    3 Rru_A2043 hypothetical protein (NCBI) no 0.58
    4 Rru_A3181 hypothetical protein (NCBI) no 0.56
    5 Rru_A3096 Glycosyl transferase, group 1 (NCBI) no 0.56
    6 Rru_A1023 hypothetical protein (NCBI) no 0.54
    7 Rru_A3372 tRNA/rRNA methyltransferase (SpoU) (NCBI) no 0.52
    8 Rru_A2725 Multi-sensor Hybrid Histidine Kinase (NCBI) no 0.51
    9 Rru_A1132 Anthranilate synthase (NCBI) no 0.51
    10 Rru_A3026 HPr kinase (NCBI) no 0.50
    11 Rru_A3025 hypothetical protein (NCBI) no 0.50
    12 Rru_A1602 ComEC/Rec2-related protein (NCBI) no 0.50
    13 Rru_A1575 hypothetical protein (NCBI) no 0.50
    14 Rru_A2472 hypothetical protein (NCBI) no 0.49
    15 Rru_A3219 Twin-arginine translocation pathway signal (NCBI) no 0.48
    16 Rru_A3410 Protein of unknown function DUF891 (NCBI) no 0.48
    17 Rru_A0982 ABC transporter component (NCBI) no 0.47
    18 Rru_A0455 NUDIX hydrolase (NCBI) no 0.47
    19 Rru_A1515 Transposase, IS4 (NCBI) no 0.47
    20 Rru_A3098 hypothetical protein (NCBI) no 0.46

    Or look for negative cofitness