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  • Top cofit genes for Rru_A0113 from Rhodospirillum rubrum S1H

    type II secretion system protein E (NCBI)
    SEED: Type IV fimbrial assembly, ATPase PilB
    KEGG: general secretion pathway protein E

    Rank Hit Name Description Conserved? Cofitness  
    1 Rru_A1101 hypothetical protein (NCBI) no 0.64
    2 Rru_A2836 hypothetical protein (NCBI) no 0.59
    3 Rru_A3327 hypothetical protein (NCBI) no 0.59
    4 Rru_A3238 hypothetical protein (NCBI) no 0.58
    5 Rru_A0651 Glutamine amidotransferase class-I (NCBI) no 0.58
    6 Rru_A1370 hypothetical protein (NCBI) no 0.57
    7 Rru_A2390 Twin-arginine translocation pathway signal (NCBI) no 0.56
    8 Rru_A2520 Penicillin-binding protein 1A (NCBI) no 0.55
    9 Rru_A1379 Acetate kinase (NCBI) no 0.55
    10 Rru_A1059 Aldo/keto reductase (NCBI) no 0.55
    11 Rru_A2422 hypothetical protein (NCBI) no 0.53
    12 Rru_A2591 hypothetical protein (NCBI) no 0.53
    13 Rru_A1069 Putative Fe-S cluster (NCBI) no 0.53
    14 Rru_A1471 Butyrate-acetoacetate CoA-transferase (NCBI) no 0.53
    15 Rru_A1245 Transcriptional Regulator, Crp/Fnr family (NCBI) no 0.52
    16 Rru_A0124 Putative diguanylate phosphodiesterase (EAL domain) (NCBI) no 0.51
    17 Rru_A2428 DSBA oxidoreductase (NCBI) no 0.51
    18 Rru_A1026 Transcriptional Regulator, MerR family (NCBI) no 0.51
    19 Rru_A2825 Flagellar basal-body rod protein FlgC (NCBI) no 0.51
    20 Rru_A0381 Major facilitator superfamily transporter MFS_1 (NCBI) no 0.50

    Or look for negative cofitness