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Cofit
Protein
Homologs
Top cofit genes for Rru_A0028 from
Rhodospirillum rubrum S1H
Beta-lactamase-like (NCBI)
SEED: SoxH protein, homolog
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rru
_A3295
circadian clock protein KaiC (NCBI)
no
0.60
2
Rru
_A3587
hypothetical protein (NCBI)
no
0.60
3
Rru
_A0424
hypothetical protein (NCBI)
no
0.57
4
Rru
_A2236
UspA (NCBI)
no
0.57
5
Rru
_B0018
Protein of unknown function DUF161 (NCBI)
no
0.56
6
Rru
_A1250
Beta-lactamase (NCBI)
no
0.55
7
Rru
_A3024
Prolyl 4-hydroxylase, alpha subunit (NCBI)
no
0.51
8
Rru
_A0383
SH3 domain protein (NCBI)
no
0.51
9
Rru
_A3510
ABC transporter component (NCBI)
no
0.50
10
Rru
_A1333
BioY protein (NCBI)
no
0.50
11
Rru
_A0387
Antibiotic biosynthesis monooxygenase (NCBI)
no
0.50
12
Rru
_A1875
Multi-sensor Signal Transduction Histidine Kinase (NCBI)
no
0.49
13
Rru
_A1871
Na/Pi cotransporter II-related (NCBI)
no
0.49
14
Rru
_A1053
chemotaxis sensory transducer (NCBI)
no
0.49
15
Rru
_A0388
Protein of unknown function DUF6, transmembrane (NCBI)
no
0.48
16
Rru
_A0632
chemotaxis sensory transducer (NCBI)
no
0.48
17
Rru
_A1248
hypothetical protein (NCBI)
no
0.47
18
Rru
_A2850
hypothetical protein (NCBI)
no
0.47
19
Rru
_A3390
hypothetical protein (NCBI)
no
0.46
20
Rru
_A1790
ABC-2 transporter component (NCBI)
0.24
0.46
Or look for
negative cofitness