Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22180

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,796,375	+		DZA65_RS22175	0.62	-0.0
4,796,376	-		DZA65_RS22175	0.62	-0.2
4,796,376	-		DZA65_RS22175	0.62	+0.2
4,796,467	+		DZA65_RS22175	0.67	+0.2
4,796,467	+		DZA65_RS22175	0.67	-0.5
4,796,482	+		DZA65_RS22175	0.68	-0.3
4,796,482	+		DZA65_RS22175	0.68	+0.2
4,796,482	+		DZA65_RS22175	0.68	+0.4
4,796,485	+		DZA65_RS22175	0.68	-0.2
4,796,509	+		DZA65_RS22175	0.70	-0.0
4,796,692	+		DZA65_RS22175	0.80	-0.1
4,796,752	+		DZA65_RS22175	0.83	-1.4
4,796,853	+		DZA65_RS22175	0.89	+0.1
4,796,853	+		DZA65_RS22175	0.89	-0.9
4,796,853	+		DZA65_RS22175	0.89	-0.1
4,796,854	-		DZA65_RS22175	0.89	+0.0
4,796,891	-				+0.2
4,797,038	+				+0.3
4,797,038	+				-0.3
4,797,038	+				-0.8
4,797,038	+				-0.2
4,797,039	-				-1.2
4,797,039	-				-1.9
4,797,039	-				+0.0
4,797,039	-				-1.2
4,797,039	-				+0.4
4,797,042	+				-0.7
4,797,042	+				+0.2
4,797,042	+				-1.3
4,797,042	+				+0.3
4,797,042	+				-0.5
4,797,042	+				+0.4
4,797,043	-				-1.9
4,797,043	-				-0.1
4,797,043	-				+0.1
4,797,043	-				-0.9
4,797,043	-				+0.3
4,797,043	-				-1.0
4,797,043	-				+0.6
4,797,043	-				-0.9
4,797,054	+				-0.5
4,797,054	+				+0.1
4,797,054	+				-0.1
4,797,054	+				+1.8
4,797,054	+				+0.4
4,797,054	+				+0.4
4,797,055	-				+0.2
4,797,055	-				-0.4
4,797,055	-				-0.6
4,797,055	-				+0.4
4,797,087	+				+0.4
4,797,087	+				-0.7
4,797,087	+				+0.1
4,797,106	+				-1.5
4,797,166	+				+0.1
4,797,166	+				-0.2
4,797,166	+				-0.9
4,797,166	+				+0.7
4,797,166	+				-0.1
4,797,166	+				-2.3
4,797,166	+				-0.2
4,797,166	+				-0.9
4,797,166	+				-0.9
4,797,166	+				+0.3
4,797,166	+				-0.5
4,797,166	+				-0.6
4,797,166	+				-1.2
4,797,167	-				-1.0
4,797,167	-				+2.6
4,797,167	-				-0.8
4,797,167	-				+0.8
4,797,167	-				-0.3
4,797,167	-				-1.6
4,797,167	-				-0.8
4,797,167	-				-1.1
4,797,170	+				-0.1
4,797,170	+				-2.1
4,797,170	+				-0.3
4,797,170	+				-1.1
4,797,170	+				+0.4
4,797,170	+				-0.3
4,797,170	+				-0.4
4,797,171	-				-1.6
4,797,171	-				+0.4
4,797,171	-				+0.9
4,797,171	-				-2.2
4,797,171	-				-0.6
4,797,171	-				-1.5
4,797,171	-				-0.6
4,797,171	-				-0.1
4,797,171	-				-0.2
4,797,195	-				-1.2
4,797,347	+		DZA65_RS22180	0.26	+1.4
4,797,347	+		DZA65_RS22180	0.26	-0.8
4,797,347	+				+0.8
4,797,347	+		DZA65_RS22180	0.26	-0.0
4,797,390	-		DZA65_RS22180	0.30	-0.4
4,797,390	-		DZA65_RS22180	0.30	-0.2
4,797,390	-		DZA65_RS22180	0.30	-1.3
4,797,390	-		DZA65_RS22180	0.30	-0.8
4,797,390	-		DZA65_RS22180	0.30	+0.6
4,797,443	+		DZA65_RS22180	0.36	+0.6
4,797,443	+		DZA65_RS22180	0.36	+0.5
4,797,443	+		DZA65_RS22180	0.36	+1.0
4,797,444	-		DZA65_RS22180	0.36	+0.0
4,797,444	-		DZA65_RS22180	0.36	-0.9
4,797,444	-		DZA65_RS22180	0.36	-1.6
4,797,444	-		DZA65_RS22180	0.36	-0.3
4,797,444	-		DZA65_RS22180	0.36	-0.5
4,797,483	-		DZA65_RS22180	0.40	+1.0
4,797,502	+		DZA65_RS22180	0.42	-0.0
4,797,502	+		DZA65_RS22180	0.42	+0.4
4,797,503	-		DZA65_RS22180	0.42	-0.6
4,797,503	-		DZA65_RS22180	0.42	+0.2
4,797,503	-		DZA65_RS22180	0.42	-0.2
4,797,503	-		DZA65_RS22180	0.42	-0.3
4,797,512	+		DZA65_RS22180	0.43	+0.6
4,797,533	+		DZA65_RS22180	0.45	-0.0
4,797,533	+		DZA65_RS22180	0.45	+0.1
4,797,534	-		DZA65_RS22180	0.46	-1.7
4,797,550	+		DZA65_RS22180	0.47	-1.6
4,797,551	-		DZA65_RS22180	0.47	-0.8
4,797,551	-		DZA65_RS22180	0.47	-1.8
4,797,551	-		DZA65_RS22180	0.47	-1.9
4,797,620	+		DZA65_RS22180	0.55	-0.6
4,797,620	+		DZA65_RS22180	0.55	-0.5
4,797,621	-		DZA65_RS22180	0.55	+0.3
4,797,621	-		DZA65_RS22180	0.55	-0.1
4,797,621	-		DZA65_RS22180	0.55	-0.7
4,797,783	+		DZA65_RS22180	0.72	+0.9
4,797,783	+		DZA65_RS22180	0.72	-1.1
4,797,807	+		DZA65_RS22180	0.75	+0.3
4,797,807	+		DZA65_RS22180	0.75	-1.1
4,797,807	+				+0.8
4,797,807	+		DZA65_RS22180	0.75	+0.6
4,797,807	+		DZA65_RS22180	0.75	+0.1
4,797,807	+		DZA65_RS22180	0.75	+0.4
4,797,807	+		DZA65_RS22180	0.75	+0.1
4,797,808	-		DZA65_RS22180	0.75	-0.1
4,797,808	-		DZA65_RS22180	0.75	-1.8
4,797,808	-		DZA65_RS22180	0.75	+1.2
4,797,808	-		DZA65_RS22180	0.75	-0.2
4,797,834	+		DZA65_RS22180	0.77	-0.2
4,797,835	-		DZA65_RS22180	0.77	-1.3
4,797,835	-		DZA65_RS22180	0.77	-0.7
4,797,931	+		DZA65_RS22180	0.88	-2.4
4,797,931	+		DZA65_RS22180	0.88	+0.2
4,797,931	+		DZA65_RS22180	0.88	-0.0
4,797,931	+		DZA65_RS22180	0.88	-0.3
4,797,931	+		DZA65_RS22180	0.88	-0.3
4,797,932	-		DZA65_RS22180	0.88	-0.2
4,797,932	-		DZA65_RS22180	0.88	-0.7
4,797,932	-		DZA65_RS22180	0.88	-1.2
4,797,932	-		DZA65_RS22180	0.88	-0.4
4,797,932	-		DZA65_RS22180	0.88	-0.6
4,797,952	-				+0.1
4,797,972	-				-0.3
4,797,997	+				-0.7
4,798,000	+				-0.8
4,798,000	+				-0.6
4,798,000	+				+0.2
4,798,000	+				+0.1
4,798,000	+				+0.3
4,798,000	+				-0.2
4,798,001	-				-0.6
4,798,001	-				+0.2
4,798,001	-				+0.4
4,798,001	-				+0.6
4,798,001	-				-1.1
4,798,001	-				-1.3
4,798,039	+				-1.6
4,798,039	+				-0.1
4,798,040	-				-0.2
4,798,042	+				-2.1
4,798,042	+				-0.4
4,798,042	+				-0.3
4,798,042	+				+0.9
4,798,042	+				-0.5
4,798,042	+				+0.7
4,798,042	+				-0.9
4,798,042	+				+0.8
4,798,043	-				+1.4
4,798,043	-				-0.5
4,798,043	-				+0.9
4,798,043	-				-2.3
4,798,043	-				-2.5
4,798,043	-				-1.5
4,798,043	-				+0.1
4,798,046	+				-2.1
4,798,046	+				-0.3
4,798,047	-				+0.4
4,798,047	-				-0.2
4,798,066	+				-1.2
4,798,066	+				+0.1
4,798,066	+				-0.4
4,798,066	+				+0.6
4,798,066	+				+0.1
4,798,066	+				-1.0
4,798,066	+				-0.2
4,798,067	-				+1.2
4,798,067	-				+0.5
4,798,067	-				-0.0
4,798,070	+				-1.1
4,798,070	+				-0.3
4,798,070	+				-0.4
4,798,070	+				-0.8
4,798,070	+				+0.0
4,798,070	+				-0.0
4,798,070	+				+0.3
4,798,070	+				-0.4
4,798,070	+				-0.2
4,798,070	+				-0.4
4,798,070	+				-0.4
4,798,071	-				-0.4
4,798,071	-				-0.6
4,798,071	-				+0.5
4,798,071	-				+0.6
4,798,071	-				-0.5
4,798,071	-				-2.1
4,798,071	-				-0.1
4,798,071	-				-0.6
4,798,071	-				+0.3
4,798,071	-				-1.6
4,798,071	-				+0.4
4,798,071	-				-0.5
4,798,071	-				+0.7
4,798,071	-				+1.1
4,798,071	-				-0.0
4,798,081	+				-0.5
4,798,081	+				-0.6
4,798,081	+				-0.7
4,798,081	+				+0.4
4,798,081	+				+0.4
4,798,081	+				+0.4
4,798,081	+				+0.1
4,798,081	+				-1.9
4,798,082	-				-0.5
4,798,082	-				-0.8
4,798,082	-				-0.4
4,798,082	-				-0.0
4,798,082	-				+1.1
4,798,082	-				-1.7
4,798,082	-				+1.4
4,798,082	-				+0.9
4,798,098	+				-1.3
4,798,098	+				-1.1
4,798,098	+				+0.7
4,798,099	-				+0.7
4,798,099	-				-0.2
4,798,100	+				-0.9
4,798,101	-				-0.3
4,798,101	-				+0.5
4,798,133	+				+0.7
4,798,134	-				+0.1
4,798,142	+				+0.8
4,798,142	+		DZA65_RS22185	0.10	-0.1
4,798,142	+		DZA65_RS22185	0.10	+0.2
4,798,142	+		DZA65_RS22185	0.10	+0.4
4,798,142	+		DZA65_RS22185	0.10	+0.9
4,798,142	+		DZA65_RS22185	0.10	+0.2
4,798,142	+		DZA65_RS22185	0.10	-1.3
4,798,143	-		DZA65_RS22185	0.11	+0.5
4,798,143	-		DZA65_RS22185	0.11	+0.3
4,798,143	-		DZA65_RS22185	0.11	+0.6
4,798,143	-		DZA65_RS22185	0.11	+0.7
4,798,143	-		DZA65_RS22185	0.11	+2.4
4,798,212	+		DZA65_RS22185	0.26	-0.8
4,798,212	+		DZA65_RS22185	0.26	+0.1
4,798,212	+		DZA65_RS22185	0.26	-0.5
4,798,212	+		DZA65_RS22185	0.26	-0.2
4,798,213	-		DZA65_RS22185	0.26	-0.3
4,798,213	-		DZA65_RS22185	0.26	+0.7
4,798,213	-		DZA65_RS22185	0.26	-0.0
4,798,218	+		DZA65_RS22185	0.28	-0.5
4,798,218	+		DZA65_RS22185	0.28	-1.4
4,798,218	+		DZA65_RS22185	0.28	-1.2
4,798,218	+		DZA65_RS22185	0.28	+0.6
4,798,218	+		DZA65_RS22185	0.28	+0.4
4,798,218	+		DZA65_RS22185	0.28	+0.1
4,798,219	-		DZA65_RS22185	0.28	-0.4
4,798,219	-		DZA65_RS22185	0.28	-0.6
4,798,219	-		DZA65_RS22185	0.28	+2.0
4,798,219	-		DZA65_RS22185	0.28	+0.5
4,798,297	+		DZA65_RS22185	0.46	-0.0
4,798,297	+		DZA65_RS22185	0.46	-1.0
4,798,297	+		DZA65_RS22185	0.46	-0.5
4,798,297	+		DZA65_RS22185	0.46	-0.1
4,798,298	-		DZA65_RS22185	0.46	-0.4
4,798,298	-		DZA65_RS22185	0.46	-1.1
4,798,298	-		DZA65_RS22185	0.46	-0.4
4,798,436	+		DZA65_RS22185	0.77	+0.9
4,798,437	-		DZA65_RS22185	0.78	+1.4
4,798,437	-		DZA65_RS22185	0.78	+1.0
4,798,437	-		DZA65_RS22185	0.78	+0.1
4,798,437	-		DZA65_RS22185	0.78	-0.5
4,798,523	+				+0.7
4,798,523	+				+0.2
4,798,523	+				+0.9
4,798,524	-				-0.2
4,798,534	+				-0.4
4,798,535	-				+0.5
4,798,543	+				-0.6
4,798,543	+				+0.4
4,798,543	+				-0.1
4,798,544	-				+1.1
4,798,544	-				+1.5
4,798,544	-				-0.9
4,798,556	+				-0.2
4,798,556	+				+0.2
4,798,557	-				+0.4
4,798,557	-				+0.0
4,798,626	+		DZA65_RS22190	0.14	-1.2
4,798,626	+		DZA65_RS22190	0.14	+0.0
4,798,626	+		DZA65_RS22190	0.14	-0.3
4,798,626	+		DZA65_RS22190	0.14	+1.7
4,798,626	+		DZA65_RS22190	0.14	-0.2
4,798,626	+		DZA65_RS22190	0.14	+0.8
4,798,627	-		DZA65_RS22190	0.14	+1.1
4,798,627	-		DZA65_RS22190	0.14	+0.6
4,798,627	-		DZA65_RS22190	0.14	+0.3
4,798,627	-		DZA65_RS22190	0.14	-0.1
4,798,627	-		DZA65_RS22190	0.14	+0.6
4,798,627	-		DZA65_RS22190	0.14	+0.8
4,798,627	-		DZA65_RS22190	0.14	+0.9
4,798,627	-		DZA65_RS22190	0.14	+2.1
4,798,655	+		DZA65_RS22190	0.18	+0.7
4,798,655	+		DZA65_RS22190	0.18	-0.6
4,798,759	+		DZA65_RS22190	0.35	-0.6
4,798,759	+		DZA65_RS22190	0.35	+0.6
4,798,760	-		DZA65_RS22190	0.36	+0.0
4,798,792	+		DZA65_RS22190	0.41	+0.3
4,798,829	+		DZA65_RS22190	0.47	+0.1
4,798,829	+		DZA65_RS22190	0.47	+0.2
4,798,830	-		DZA65_RS22190	0.47	-0.1
4,798,839	+		DZA65_RS22190	0.49	+0.0
4,798,839	+		DZA65_RS22190	0.49	-0.2
4,798,839	+		DZA65_RS22190	0.49	-0.3
4,798,839	+		DZA65_RS22190	0.49	+0.2
4,798,839	+		DZA65_RS22190	0.49	-0.3
4,798,840	-		DZA65_RS22190	0.49	-0.4
4,798,840	-		DZA65_RS22190	0.49	+0.5
4,798,840	-		DZA65_RS22190	0.49	+0.2
4,798,840	-		DZA65_RS22190	0.49	+0.4
4,798,840	-		DZA65_RS22190	0.49	+1.2
4,798,840	-		DZA65_RS22190	0.49	-0.7
4,798,840	-		DZA65_RS22190	0.49	+0.4
4,798,840	-		DZA65_RS22190	0.49	-1.2
4,798,842	+		DZA65_RS22190	0.49	-0.8
4,798,843	-		DZA65_RS22190	0.49	+1.2
4,798,843	-		DZA65_RS22190	0.49	-1.0
4,798,899	+		DZA65_RS22190	0.58	-0.3
4,798,899	+		DZA65_RS22190	0.58	-0.7
4,798,900	-		DZA65_RS22190	0.58	-1.2
4,798,900	-		DZA65_RS22190	0.58	+0.4