Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21440

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,635,322	+		DZA65_RS21430	0.49	-0.0
4,635,322	+		DZA65_RS21430	0.49	-1.6
4,635,323	-		DZA65_RS21430	0.49	+0.2
4,635,323	-		DZA65_RS21430	0.49	-1.8
4,635,323	-		DZA65_RS21430	0.49	+0.8
4,635,433	+		DZA65_RS21430	0.59	-0.7
4,635,433	+		DZA65_RS21430	0.59	-0.5
4,635,434	-		DZA65_RS21430	0.59	-0.1
4,635,529	+		DZA65_RS21430	0.68	-0.5
4,635,529	+		DZA65_RS21430	0.68	-1.3
4,635,529	+		DZA65_RS21430	0.68	-0.4
4,635,529	+		DZA65_RS21430	0.68	-0.3
4,635,529	+		DZA65_RS21430	0.68	-0.2
4,635,529	+		DZA65_RS21430	0.68	-1.1
4,635,530	-		DZA65_RS21430	0.68	+1.7
4,635,530	-		DZA65_RS21430	0.68	-0.2
4,635,530	-		DZA65_RS21430	0.68	+0.3
4,635,534	+		DZA65_RS21430	0.68	-0.6
4,635,534	+		DZA65_RS21430	0.68	-1.9
4,635,534	+		DZA65_RS21430	0.68	-0.1
4,635,534	+		DZA65_RS21430	0.68	-1.4
4,635,535	-		DZA65_RS21430	0.68	+0.4
4,635,535	-		DZA65_RS21430	0.68	+0.8
4,635,535	-		DZA65_RS21430	0.68	+2.0
4,635,555	+		DZA65_RS21430	0.70	+0.1
4,635,555	+		DZA65_RS21430	0.70	-0.3
4,635,555	+		DZA65_RS21430	0.70	-0.0
4,635,556	-		DZA65_RS21430	0.70	+0.5
4,635,556	-		DZA65_RS21430	0.70	-2.2
4,635,556	-		DZA65_RS21430	0.70	-0.7
4,635,568	-		DZA65_RS21430	0.71	-0.8
4,635,568	-		DZA65_RS21430	0.71	+0.4
4,635,591	+		DZA65_RS21430	0.73	-0.0
4,635,600	+		DZA65_RS21430	0.74	-0.0
4,635,600	+		DZA65_RS21430	0.74	-1.7
4,635,601	-		DZA65_RS21430	0.74	+0.2
4,635,611	+		DZA65_RS21430	0.75	+0.8
4,635,611	+		DZA65_RS21430	0.75	+0.1
4,635,611	+		DZA65_RS21430	0.75	+0.2
4,635,612	-		DZA65_RS21430	0.75	+0.6
4,635,612	-		DZA65_RS21430	0.75	-0.1
4,635,653	-		DZA65_RS21430	0.79	-0.0
4,635,710	+		DZA65_RS21430	0.84	-1.5
4,635,710	+		DZA65_RS21430	0.84	-0.6
4,635,711	-		DZA65_RS21430	0.84	+0.3
4,635,711	-		DZA65_RS21430	0.84	-1.1
4,635,711	-		DZA65_RS21430	0.84	-0.0
4,635,711	-		DZA65_RS21430	0.84	+1.0
4,635,711	-		DZA65_RS21430	0.84	+2.7
4,635,711	-		DZA65_RS21430	0.84	+0.4
4,635,742	+		DZA65_RS21430	0.87	+0.2
4,635,742	+		DZA65_RS21430	0.87	+0.2
4,635,742	+		DZA65_RS21430	0.87	+0.4
4,635,742	+		DZA65_RS21430	0.87	+0.1
4,635,742	+		DZA65_RS21430	0.87	-1.1
4,635,742	+		DZA65_RS21430	0.87	-1.0
4,635,742	+		DZA65_RS21430	0.87	-0.0
4,635,742	+		DZA65_RS21430	0.87	-0.4
4,635,742	+		DZA65_RS21430	0.87	+1.1
4,635,742	+		DZA65_RS21430	0.87	-1.5
4,635,742	+		DZA65_RS21430	0.87	+1.4
4,635,742	+		DZA65_RS21430	0.87	+0.1
4,635,743	-		DZA65_RS21430	0.87	+0.2
4,635,743	-		DZA65_RS21430	0.87	+0.5
4,635,743	-		DZA65_RS21430	0.87	-1.4
4,635,743	-		DZA65_RS21430	0.87	-0.1
4,635,743	-				-0.2
4,635,743	-		DZA65_RS21430	0.87	-0.6
4,635,743	-		DZA65_RS21430	0.87	+0.2
4,635,838	+				-0.3
4,635,839	-				+0.6
4,635,839	-				-2.1
4,635,839	-				+0.5
4,635,839	-				-0.2
4,635,839	-				+0.2
4,635,840	+				-0.3
4,635,840	+				-0.6
4,635,840	+				+0.4
4,635,840	+				+0.7
4,635,840	+				-0.7
4,635,840	+				-1.2
4,635,840	+				-0.4
4,635,840	+				+0.1
4,635,841	-				+0.4
4,635,841	-				+0.4
4,635,841	-				-2.1
4,635,866	+				+0.8
4,635,883	+				-0.9
4,635,883	+				-1.7
4,635,884	-				-0.0
4,636,013	+		DZA65_RS21435	0.31	+0.6
4,636,035	+		DZA65_RS21435	0.37	+1.1
4,636,037	+		DZA65_RS21435	0.37	+0.5
4,636,037	+		DZA65_RS21435	0.37	-0.2
4,636,037	+		DZA65_RS21435	0.37	+0.5
4,636,037	+		DZA65_RS21435	0.37	+0.4
4,636,038	-		DZA65_RS21435	0.37	+0.4
4,636,038	-		DZA65_RS21435	0.37	+1.2
4,636,038	-		DZA65_RS21435	0.37	-0.1
4,636,038	-				+1.1
4,636,038	-		DZA65_RS21435	0.37	-1.2
4,636,038	-		DZA65_RS21435	0.37	-0.2
4,636,038	-		DZA65_RS21435	0.37	-0.0
4,636,038	-		DZA65_RS21435	0.37	-0.8
4,636,038	-		DZA65_RS21435	0.37	-2.1
4,636,109	+		DZA65_RS21435	0.56	+0.2
4,636,109	+		DZA65_RS21435	0.56	-1.8
4,636,109	+		DZA65_RS21435	0.56	+1.6
4,636,109	+		DZA65_RS21435	0.56	+0.2
4,636,109	+		DZA65_RS21435	0.56	-0.7
4,636,110	-		DZA65_RS21435	0.57	-0.2
4,636,110	-		DZA65_RS21435	0.57	-0.7
4,636,110	-		DZA65_RS21435	0.57	-0.2
4,636,110	-		DZA65_RS21435	0.57	-1.3
4,636,127	+		DZA65_RS21435	0.61	-0.0
4,636,128	-		DZA65_RS21435	0.61	-0.3
4,636,176	+		DZA65_RS21435	0.74	+0.5
4,636,176	+		DZA65_RS21435	0.74	+1.2
4,636,258	+				-0.6
4,636,259	-				-1.8
4,636,259	-				-0.9
4,636,288	+				-0.2
4,636,336	+				-1.0
4,636,336	+				-0.2
4,636,337	-				-1.7
4,636,340	-				-2.4
4,636,340	-				-0.9
4,636,340	-				-2.1
4,636,340	-				-2.2
4,636,340	-				-2.0
4,636,404	+		DZA65_RS21440	0.18	-0.5
4,636,404	+		DZA65_RS21440	0.18	-0.9
4,636,404	+		DZA65_RS21440	0.18	-0.1
4,636,404	+		DZA65_RS21440	0.18	-1.6
4,636,404	+		DZA65_RS21440	0.18	-0.2
4,636,404	+		DZA65_RS21440	0.18	-0.3
4,636,404	+		DZA65_RS21440	0.18	-0.4
4,636,404	+		DZA65_RS21440	0.18	-0.9
4,636,404	+		DZA65_RS21440	0.18	-1.0
4,636,404	+		DZA65_RS21440	0.18	-0.0
4,636,404	+		DZA65_RS21440	0.18	-1.7
4,636,404	+		DZA65_RS21440	0.18	-1.8
4,636,404	+		DZA65_RS21440	0.18	-0.9
4,636,404	+		DZA65_RS21440	0.18	-1.7
4,636,404	+		DZA65_RS21440	0.18	-2.5
4,636,404	+		DZA65_RS21440	0.18	-1.9
4,636,405	-		DZA65_RS21440	0.18	-0.8
4,636,405	-		DZA65_RS21440	0.18	-2.0
4,636,405	-		DZA65_RS21440	0.18	-1.7
4,636,405	-		DZA65_RS21440	0.18	-1.4
4,636,405	-		DZA65_RS21440	0.18	+0.1
4,636,405	-		DZA65_RS21440	0.18	-0.7
4,636,405	-		DZA65_RS21440	0.18	-2.1
4,636,405	-		DZA65_RS21440	0.18	-1.1
4,636,405	-		DZA65_RS21440	0.18	-0.9
4,636,405	-		DZA65_RS21440	0.18	-1.4
4,636,405	-		DZA65_RS21440	0.18	-1.3
4,636,405	-				-0.2
4,636,405	-		DZA65_RS21440	0.18	-1.8
4,636,405	-		DZA65_RS21440	0.18	-1.6
4,636,405	-		DZA65_RS21440	0.18	-1.5
4,636,405	-		DZA65_RS21440	0.18	-0.3
4,636,405	-		DZA65_RS21440	0.18	-1.0
4,636,405	-		DZA65_RS21440	0.18	-1.5
4,636,405	-		DZA65_RS21440	0.18	-0.9
4,636,407	-		DZA65_RS21440	0.19	-1.0
4,636,407	-		DZA65_RS21440	0.19	-1.8
4,636,440	+		DZA65_RS21440	0.24	-0.7
4,636,440	+		DZA65_RS21440	0.24	-1.0
4,636,440	+		DZA65_RS21440	0.24	-1.8
4,636,440	+		DZA65_RS21440	0.24	-2.7
4,636,441	-		DZA65_RS21440	0.24	-0.5
4,636,490	+		DZA65_RS21440	0.32	-1.2
4,636,491	-		DZA65_RS21440	0.32	-1.6
4,636,510	+		DZA65_RS21440	0.35	-1.3
4,636,510	+		DZA65_RS21440	0.35	-1.7
4,636,510	+		DZA65_RS21440	0.35	-0.8
4,636,511	-		DZA65_RS21440	0.35	-0.5
4,636,511	-		DZA65_RS21440	0.35	-0.3
4,636,511	-		DZA65_RS21440	0.35	-1.9
4,636,686	-		DZA65_RS21440	0.62	-2.1
4,636,686	-		DZA65_RS21440	0.62	-1.1
4,636,780	+		DZA65_RS21440	0.77	-2.2
4,636,781	-		DZA65_RS21440	0.77	-0.6
4,636,844	+		DZA65_RS21440	0.87	-1.6
4,636,845	-		DZA65_RS21440	0.87	+0.4
4,636,845	-		DZA65_RS21440	0.87	-0.3
4,636,845	-		DZA65_RS21440	0.87	-1.3
4,636,845	-		DZA65_RS21440	0.87	-0.4
4,636,857	+		DZA65_RS21440	0.89	-0.7
4,636,926	+				-1.1
4,636,927	-				-0.9
4,636,954	+				-1.6
4,636,954	+				-1.6
4,636,954	+				+0.1
4,636,954	+				-1.7
4,636,954	+				-0.8
4,636,955	-				-0.8
4,636,955	-				+0.9
4,636,955	-				-0.2
4,636,955	-				-0.7
4,636,955	-				-0.4
4,636,955	-				-1.9
4,636,955	-				-0.3
4,636,972	+				+1.4
4,636,972	+				-1.0
4,636,972	+				-1.5
4,636,972	+				-1.6
4,636,972	+				-0.5
4,636,972	+				-1.1
4,636,972	+				-0.5
4,636,972	+				+0.1
4,636,972	+				-1.2
4,636,972	+				-1.6
4,636,972	+				-0.6
4,636,972	+				-0.9
4,636,972	+				-1.0
4,636,972	+				-1.2
4,636,972	+				-0.5
4,636,972	+				-0.3
4,636,972	+				-1.1
4,636,972	+				-1.1
4,636,972	+				-1.0
4,636,972	+				-1.1
4,636,972	+				-2.3
4,636,972	+				-0.5
4,636,972	+				-1.6
4,636,972	+				+1.2
4,636,972	+				-0.8
4,636,972	+				-1.0
4,636,973	-				+0.4
4,636,973	-				+1.5
4,636,973	-				-0.0
4,636,973	-				+1.4
4,636,973	-				+0.5
4,636,973	-				-0.1
4,636,973	-				+0.6
4,636,973	-				+0.4
4,636,974	+				-0.9
4,636,974	+				-1.3
4,636,974	+				-0.6
4,636,974	+				-0.0
4,636,975	-				+0.4
4,636,975	-				+0.1
4,636,984	+				-2.2
4,636,984	+				-0.8
4,636,984	+				-0.2
4,636,984	+				-0.1
4,636,985	-				+0.4
4,636,985	-				-0.6
4,636,985	-				-1.6
4,636,995	+				+0.6
4,636,995	+				-1.2
4,636,995	+				+0.1
4,636,996	-				+0.2
4,636,996	-				+0.8
4,637,015	+				-0.3
4,637,015	+				-0.2
4,637,015	+				+0.1
4,637,016	-				+0.5
4,637,016	-				+0.6
4,637,018	+				+0.1
4,637,018	+				-1.8
4,637,018	+				+0.4
4,637,018	+				+0.3
4,637,084	-				+1.1
4,637,123	+				+0.3
4,637,134	+				+0.7
4,637,145	+				+0.5
4,637,145	+				+0.8
4,637,233	+				-0.0
4,637,244	+				-0.2
4,637,247	+				+1.1
4,637,248	-				-0.2
4,637,346	+		DZA65_RS21445	0.15	-1.9
4,637,347	-		DZA65_RS21445	0.15	-0.4
4,637,347	-		DZA65_RS21445	0.15	+0.8
4,637,347	-		DZA65_RS21445	0.15	-0.8
4,637,501	+		DZA65_RS21445	0.26	-0.6
4,637,583	+		DZA65_RS21445	0.32	-1.6
4,637,584	-		DZA65_RS21445	0.32	+0.5
4,637,622	+		DZA65_RS21445	0.35	-2.5
4,637,677	-		DZA65_RS21445	0.39	-2.4
4,637,805	+		DZA65_RS21445	0.48	+0.1