Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19230

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,157,028	+		DZA65_RS19225	0.23	-0.2
4,157,029	-		DZA65_RS19225	0.23	+0.1
4,157,029	-		DZA65_RS19225	0.23	+0.9
4,157,084	-		DZA65_RS19225	0.30	+0.8
4,157,084	-		DZA65_RS19225	0.30	-0.9
4,157,084	-		DZA65_RS19225	0.30	+1.2
4,157,143	+		DZA65_RS19225	0.36	-0.1
4,157,169	+		DZA65_RS19225	0.39	+0.7
4,157,169	+		DZA65_RS19225	0.39	-0.0
4,157,170	-		DZA65_RS19225	0.39	-0.1
4,157,187	+		DZA65_RS19225	0.41	+0.4
4,157,467	+				+1.2
4,157,467	+		DZA65_RS19225	0.72	-0.4
4,157,467	+		DZA65_RS19225	0.72	+0.1
4,157,467	+		DZA65_RS19225	0.72	-0.2
4,157,468	-		DZA65_RS19225	0.72	-1.6
4,157,468	-		DZA65_RS19225	0.72	+1.2
4,157,468	-		DZA65_RS19225	0.72	+0.6
4,157,516	+		DZA65_RS19225	0.78	+0.6
4,157,516	+		DZA65_RS19225	0.78	+0.1
4,157,516	+		DZA65_RS19225	0.78	-0.7
4,157,516	+		DZA65_RS19225	0.78	-0.8
4,157,516	+		DZA65_RS19225	0.78	-1.1
4,157,516	+		DZA65_RS19225	0.78	-1.0
4,157,517	-		DZA65_RS19225	0.78	-1.4
4,157,517	-		DZA65_RS19225	0.78	-1.3
4,157,517	-		DZA65_RS19225	0.78	+0.5
4,157,518	+		DZA65_RS19225	0.78	-0.3
4,157,518	+		DZA65_RS19225	0.78	+0.2
4,157,518	+		DZA65_RS19225	0.78	+0.5
4,157,518	+		DZA65_RS19225	0.78	+0.3
4,157,519	-		DZA65_RS19225	0.78	-0.3
4,157,519	-		DZA65_RS19225	0.78	-1.8
4,157,519	-		DZA65_RS19225	0.78	-0.3
4,157,634	+				-1.1
4,157,681	+				-0.4
4,157,681	+				+0.7
4,157,681	+				+0.8
4,157,681	+				+0.4
4,157,681	+				-1.4
4,157,681	+				-0.8
4,157,682	-				-0.1
4,157,682	-				+0.5
4,157,682	-				-1.5
4,157,682	-				-0.6
4,157,682	-				-0.2
4,157,682	-				-0.4
4,157,696	+				+0.1
4,157,696	+				+0.3
4,157,696	+				-0.8
4,157,696	+				+0.5
4,157,696	+				+1.0
4,157,696	+				-1.4
4,157,696	+				+0.9
4,157,696	+				-1.1
4,157,697	-				-0.0
4,157,697	-				-0.4
4,157,697	-				+0.3
4,157,698	+				+0.2
4,157,698	+				-1.4
4,157,698	+				+0.3
4,157,699	-				+0.4
4,157,699	-				+0.4
4,157,699	-				-0.3
4,157,699	-				+0.5
4,157,718	-				-0.4
4,157,718	-				+0.1
4,157,718	-				+0.7
4,157,728	+				-0.7
4,157,729	-				+0.1
4,157,729	-				+0.4
4,157,729	-				+0.8
4,157,811	-				-0.2
4,157,839	+				+1.1
4,157,869	+				-0.8
4,157,870	-				+0.1
4,157,955	+				-0.1
4,157,955	+				+0.5
4,157,956	-				-1.0
4,158,130	-				-1.1
4,158,130	-				+0.1
4,158,168	+				+0.7
4,158,224	+				-0.6
4,158,270	+				-0.2
4,158,270	+				-0.2
4,158,270	+				-0.4
4,158,270	+				+0.3
4,158,270	+				-0.6
4,158,270	+				-1.0
4,158,271	-				-0.4
4,158,271	-				+0.1
4,158,272	+				+0.5
4,158,303	+				+0.5
4,158,303	+				-0.6
4,158,303	+				-1.0
4,158,303	+				+0.9
4,158,303	+				+0.9
4,158,303	+				+0.6
4,158,303	+				-0.0
4,158,304	-				+1.1
4,158,304	-				-0.0
4,158,304	-				+1.4
4,158,304	-				+0.7
4,158,304	-				+1.4
4,158,304	-				+0.4
4,158,304	-				+0.1
4,158,402	+		DZA65_RS19235	0.16	+0.5
4,158,402	+		DZA65_RS19235	0.16	+0.7
4,158,402	+		DZA65_RS19235	0.16	+1.7
4,158,402	+		DZA65_RS19235	0.16	-0.3
4,158,402	+		DZA65_RS19235	0.16	-0.8
4,158,402	+		DZA65_RS19235	0.16	+0.2
4,158,402	+		DZA65_RS19235	0.16	-0.4
4,158,402	+		DZA65_RS19235	0.16	+0.1
4,158,402	+		DZA65_RS19235	0.16	+0.8
4,158,402	+		DZA65_RS19235	0.16	+0.9
4,158,402	+		DZA65_RS19235	0.16	+0.6
4,158,402	+		DZA65_RS19235	0.16	-0.3
4,158,402	+		DZA65_RS19235	0.16	+0.2
4,158,402	+		DZA65_RS19235	0.16	-0.2
4,158,403	-		DZA65_RS19235	0.16	-0.5
4,158,403	-		DZA65_RS19235	0.16	-0.5
4,158,403	-		DZA65_RS19235	0.16	-1.0
4,158,403	-		DZA65_RS19235	0.16	-0.6
4,158,403	-		DZA65_RS19235	0.16	+0.1
4,158,403	-		DZA65_RS19235	0.16	+1.1
4,158,403	-		DZA65_RS19235	0.16	+0.1
4,158,403	-		DZA65_RS19235	0.16	+0.1
4,158,405	+		DZA65_RS19235	0.16	+0.2
4,158,405	+		DZA65_RS19235	0.16	-0.8
4,158,405	+		DZA65_RS19235	0.16	+0.9
4,158,405	+		DZA65_RS19235	0.16	+0.4
4,158,405	+		DZA65_RS19235	0.16	-0.3
4,158,406	-		DZA65_RS19235	0.17	-0.7
4,158,406	-		DZA65_RS19235	0.17	-1.5
4,158,406	-		DZA65_RS19235	0.17	-0.1
4,158,406	-		DZA65_RS19235	0.17	-0.3
4,158,406	-		DZA65_RS19235	0.17	-0.2
4,158,406	-		DZA65_RS19235	0.17	-0.3
4,158,648	+		DZA65_RS19235	0.34	+0.8
4,158,648	+		DZA65_RS19235	0.34	+0.4
4,158,648	+		DZA65_RS19235	0.34	+0.7
4,158,648	+		DZA65_RS19235	0.34	-1.0
4,158,648	+		DZA65_RS19235	0.34	+0.4
4,158,649	-				+1.9
4,158,649	-		DZA65_RS19235	0.34	+0.3
4,158,649	-		DZA65_RS19235	0.34	-0.4
4,158,649	-		DZA65_RS19235	0.34	+0.3
4,158,649	-		DZA65_RS19235	0.34	+1.9
4,158,649	-		DZA65_RS19235	0.34	-0.0
4,158,651	+		DZA65_RS19235	0.34	-0.2
4,158,651	+		DZA65_RS19235	0.34	+1.6
4,158,651	+		DZA65_RS19235	0.34	-0.6
4,158,651	+		DZA65_RS19235	0.34	+0.7
4,158,652	-		DZA65_RS19235	0.34	-0.4
4,158,728	+		DZA65_RS19235	0.40	-1.1
4,158,785	+		DZA65_RS19235	0.44	-0.8
4,158,785	+		DZA65_RS19235	0.44	-0.4
4,158,786	-		DZA65_RS19235	0.44	+0.6
4,158,786	-		DZA65_RS19235	0.44	+0.3
4,158,786	-		DZA65_RS19235	0.44	-0.2
4,158,798	+		DZA65_RS19235	0.45	-0.5
4,158,799	-		DZA65_RS19235	0.45	+0.4
4,158,930	+		DZA65_RS19235	0.54	-0.8
4,158,930	+		DZA65_RS19235	0.54	-0.4
4,158,930	+		DZA65_RS19235	0.54	+0.1
4,158,930	+		DZA65_RS19235	0.54	-0.7
4,158,930	+		DZA65_RS19235	0.54	+0.2
4,158,930	+		DZA65_RS19235	0.54	-0.1
4,158,930	+		DZA65_RS19235	0.54	+0.7
4,158,931	-		DZA65_RS19235	0.54	+0.0
4,158,931	-		DZA65_RS19235	0.54	+1.2
4,158,931	-		DZA65_RS19235	0.54	+0.9
4,158,931	-		DZA65_RS19235	0.54	-0.5
4,158,931	-		DZA65_RS19235	0.54	+0.5
4,158,931	-		DZA65_RS19235	0.54	+1.0
4,158,931	-		DZA65_RS19235	0.54	+0.9
4,158,931	-		DZA65_RS19235	0.54	-0.1
4,158,931	-		DZA65_RS19235	0.54	-2.3
4,159,071	+		DZA65_RS19235	0.64	-0.2
4,159,071	+		DZA65_RS19235	0.64	-0.6
4,159,071	+		DZA65_RS19235	0.64	+0.3
4,159,071	+		DZA65_RS19235	0.64	+0.9
4,159,071	+		DZA65_RS19235	0.64	-0.9
4,159,071	+		DZA65_RS19235	0.64	-1.3
4,159,072	-		DZA65_RS19235	0.64	-0.5
4,159,072	-		DZA65_RS19235	0.64	+0.0
4,159,072	-		DZA65_RS19235	0.64	+0.3
4,159,072	-		DZA65_RS19235	0.64	+1.5