Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19045

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,116,382	+				-0.5
4,116,382	+				-0.4
4,116,382	+				+0.4
4,116,382	+				-1.0
4,116,382	+				+0.6
4,116,382	+				-2.0
4,116,382	+				+0.2
4,116,382	+				-1.2
4,116,382	+				-1.4
4,116,382	+				-0.4
4,116,382	+				+0.9
4,116,382	+				-1.4
4,116,382	+				-0.2
4,116,382	+				-0.7
4,116,382	+				+0.9
4,116,383	-				-1.0
4,116,383	-				-1.1
4,116,383	-				-1.6
4,116,383	-				-0.7
4,116,383	-				-0.8
4,116,383	-				-0.8
4,116,383	-				-0.7
4,116,383	-				-2.1
4,116,383	-				-2.3
4,116,383	-				+0.4
4,116,383	-				-2.3
4,116,383	-				-1.9
4,116,383	-				-0.3
4,116,383	-				+0.5
4,116,383	-				-1.1
4,116,383	-				-0.4
4,116,384	+				-1.6
4,116,384	+				-2.6
4,116,384	+				-1.2
4,116,384	+				-0.0
4,116,384	+				-1.3
4,116,384	+				-0.6
4,116,385	-				-1.4
4,116,385	-				+2.0
4,116,385	-				-1.0
4,116,393	-				-1.1
4,116,445	+				+0.1
4,116,445	+				-0.7
4,116,446	-				+0.0
4,116,446	-				+1.1
4,116,471	+				-0.2
4,116,472	-				+0.0
4,116,472	-				-0.3
4,116,472	-				-1.3
4,116,550	+				+0.2
4,116,551	-				-0.6
4,116,551	-				+0.4
4,116,551	-				-3.0
4,116,551	-				-0.2
4,116,705	+				+0.6
4,116,705	+				-1.4
4,116,705	+				+0.2
4,116,706	-				-0.8
4,116,706	-				+0.1
4,116,706	-				+0.4
4,116,706	-				-0.0
4,116,706	-				+0.2
4,116,706	-				+0.0
4,116,732	+				+0.4
4,116,733	-				+1.2
4,116,733	-				-0.6
4,116,733	-				-0.2
4,116,733	-				-0.1
4,116,794	-		DZA65_RS19040	0.19	+1.0
4,116,802	+		DZA65_RS19040	0.21	+0.9
4,116,802	+		DZA65_RS19040	0.21	+0.7
4,116,802	+		DZA65_RS19040	0.21	+0.4
4,116,803	-		DZA65_RS19040	0.21	+0.6
4,116,851	-		DZA65_RS19040	0.32	-0.4
4,116,852	+		DZA65_RS19040	0.32	+0.0
4,116,852	+		DZA65_RS19040	0.32	+0.7
4,116,853	-		DZA65_RS19040	0.32	+0.5
4,116,936	+		DZA65_RS19040	0.51	+0.1
4,116,936	+		DZA65_RS19040	0.51	+0.9
4,116,936	+		DZA65_RS19040	0.51	-0.4
4,116,936	+		DZA65_RS19040	0.51	-0.3
4,116,936	+		DZA65_RS19040	0.51	-0.4
4,116,936	+		DZA65_RS19040	0.51	-0.4
4,116,937	-		DZA65_RS19040	0.51	+1.7
4,116,937	-		DZA65_RS19040	0.51	+0.1
4,116,937	-		DZA65_RS19040	0.51	+1.0
4,116,937	-		DZA65_RS19040	0.51	-0.5
4,116,937	-		DZA65_RS19040	0.51	+0.0
4,116,937	-		DZA65_RS19040	0.51	-0.2
4,116,937	-		DZA65_RS19040	0.51	-0.4
4,116,946	+		DZA65_RS19040	0.53	-0.8
4,116,946	+		DZA65_RS19040	0.53	-0.6
4,116,947	-		DZA65_RS19040	0.54	+0.1
4,116,981	+		DZA65_RS19040	0.61	-0.9
4,116,982	-		DZA65_RS19040	0.61	-0.2
4,117,024	-		DZA65_RS19040	0.71	+0.6
4,117,024	-		DZA65_RS19040	0.71	-0.9
4,117,099	-		DZA65_RS19040	0.88	-0.2
4,117,141	-				+1.4
4,117,192	+				+0.2
4,117,192	+				-0.4
4,117,192	+				+0.2
4,117,192	+				+0.4
4,117,192	+				+1.5
4,117,392	+		DZA65_RS19045	0.16	+1.2
4,117,534	+		DZA65_RS19045	0.26	+0.5
4,117,534	+		DZA65_RS19045	0.26	-0.6
4,117,534	+		DZA65_RS19045	0.26	-1.4
4,117,535	-				+0.8
4,117,535	-		DZA65_RS19045	0.27	+0.2
4,117,535	-		DZA65_RS19045	0.27	-0.6
4,117,535	-		DZA65_RS19045	0.27	-0.7
4,117,538	+		DZA65_RS19045	0.27	+0.5
4,117,538	+		DZA65_RS19045	0.27	-1.1
4,117,538	+		DZA65_RS19045	0.27	+0.4
4,117,606	+		DZA65_RS19045	0.32	+0.4
4,117,893	+		DZA65_RS19045	0.52	+1.6
4,117,893	+		DZA65_RS19045	0.52	-0.8
4,117,893	+		DZA65_RS19045	0.52	-0.1
4,117,893	+		DZA65_RS19045	0.52	-0.4
4,117,894	-		DZA65_RS19045	0.52	-0.4
4,117,894	-		DZA65_RS19045	0.52	-1.1
4,117,894	-		DZA65_RS19045	0.52	+0.5
4,117,894	-		DZA65_RS19045	0.52	+0.4
4,117,894	-		DZA65_RS19045	0.52	-0.4
4,117,894	-		DZA65_RS19045	0.52	-0.1
4,117,894	-		DZA65_RS19045	0.52	+0.0
4,117,923	-		DZA65_RS19045	0.54	-1.1
4,117,931	+		DZA65_RS19045	0.54	-0.2
4,117,932	-		DZA65_RS19045	0.54	-0.4
4,117,932	-		DZA65_RS19045	0.54	-0.2
4,117,952	+		DZA65_RS19045	0.56	+0.2
4,117,952	+		DZA65_RS19045	0.56	+0.0
4,118,131	+		DZA65_RS19045	0.68	-0.1
4,118,132	-		DZA65_RS19045	0.68	-0.6
4,118,132	-		DZA65_RS19045	0.68	+0.0
4,118,132	-		DZA65_RS19045	0.68	-0.1
4,118,138	+		DZA65_RS19045	0.69	-0.3
4,118,148	-		DZA65_RS19045	0.70	-1.0
4,118,148	-		DZA65_RS19045	0.70	-0.7
4,118,148	-		DZA65_RS19045	0.70	+0.9
4,118,148	-		DZA65_RS19045	0.70	+0.5
4,118,293	+		DZA65_RS19045	0.80	-0.6
4,118,373	+		DZA65_RS19045	0.85	+1.0
4,118,373	+		DZA65_RS19045	0.85	-0.8
4,118,374	-		DZA65_RS19045	0.86	-0.2
4,118,391	+		DZA65_RS19045	0.87	-1.2
4,118,391	+		DZA65_RS19045	0.87	-0.4
4,118,391	+		DZA65_RS19045	0.87	-0.6
4,118,391	+		DZA65_RS19045	0.87	-0.2
4,118,392	-		DZA65_RS19045	0.87	+0.3
4,118,392	-		DZA65_RS19045	0.87	+0.4
4,118,392	-		DZA65_RS19045	0.87	+0.2
4,118,392	-		DZA65_RS19045	0.87	-0.3
4,118,550	+				+0.1
4,118,570	+				+0.5
4,118,577	+				+1.5
4,118,577	+				+0.6
4,118,578	-				+0.3
4,118,585	+				+0.4
4,118,585	+				-0.3
4,118,585	+				+1.2
4,118,585	+				+1.3
4,118,585	+				-0.6
4,118,585	+				-0.1
4,118,585	+				-1.1
4,118,585	+				-0.1
4,118,585	+				+0.5
4,118,585	+				+0.4
4,118,586	-				-0.0
4,118,586	-				+2.0
4,118,586	-				+1.6
4,118,586	-				-0.9
4,118,586	-				-0.1
4,118,586	-				-0.4
4,118,596	+				-0.0
4,118,597	-				-1.6
4,118,597	-				-0.0
4,118,597	-				-0.4
4,118,597	-				-1.2
4,118,607	+				+0.1
4,118,607	+				+0.3
4,118,607	+				+0.6
4,118,607	+				+0.1
4,118,607	+				+0.4
4,118,608	-				+0.1
4,118,608	-				+0.5
4,118,608	-				-0.6
4,118,608	-				-0.1
4,118,608	-				+0.2
4,118,610	+				+0.5
4,118,610	+				-0.0
4,118,682	+				-0.0
4,118,682	+				+2.8
4,118,689	-				-0.4
4,118,689	-				+0.4
4,118,689	-				-0.4
4,118,689	-				+0.3
4,118,716	+				+0.4
4,118,716	+		DZA65_RS19050	0.11	-0.3
4,118,717	-		DZA65_RS19050	0.11	-0.7
4,118,737	-				+0.2
4,118,737	-		DZA65_RS19050	0.12	-0.0
4,118,737	-		DZA65_RS19050	0.12	-0.0
4,118,834	-		DZA65_RS19050	0.20	-0.4
4,118,834	-		DZA65_RS19050	0.20	+0.1
4,118,929	+		DZA65_RS19050	0.28	-0.6
4,118,929	+		DZA65_RS19050	0.28	-0.4
4,118,929	+		DZA65_RS19050	0.28	-1.8
4,118,929	+		DZA65_RS19050	0.28	+0.0
4,118,929	+		DZA65_RS19050	0.28	+0.4
4,118,930	-		DZA65_RS19050	0.28	-0.1
4,118,930	-		DZA65_RS19050	0.28	-0.0
4,118,930	-		DZA65_RS19050	0.28	+0.5
4,118,930	-		DZA65_RS19050	0.28	-0.4
4,119,033	+		DZA65_RS19050	0.37	-0.3
4,119,033	+		DZA65_RS19050	0.37	+0.3
4,119,034	-		DZA65_RS19050	0.37	-1.1
4,119,034	-		DZA65_RS19050	0.37	-1.1
4,119,124	+		DZA65_RS19050	0.44	+0.2
4,119,124	+		DZA65_RS19050	0.44	-0.1
4,119,125	-		DZA65_RS19050	0.44	-0.9
4,119,125	-		DZA65_RS19050	0.44	-1.2
4,119,125	-		DZA65_RS19050	0.44	-0.3
4,119,133	+		DZA65_RS19050	0.45	+0.4
4,119,142	+		DZA65_RS19050	0.46	-0.3
4,119,143	-		DZA65_RS19050	0.46	+0.1
4,119,143	-		DZA65_RS19050	0.46	+0.8
4,119,163	+		DZA65_RS19050	0.48	+0.1
4,119,165	+		DZA65_RS19050	0.48	+0.2
4,119,165	+		DZA65_RS19050	0.48	-0.6
4,119,165	+		DZA65_RS19050	0.48	+0.1
4,119,165	+		DZA65_RS19050	0.48	+1.4
4,119,165	+		DZA65_RS19050	0.48	+0.0
4,119,166	-				+0.2
4,119,217	+		DZA65_RS19050	0.52	+0.3
4,119,242	+		DZA65_RS19050	0.54	-0.3
4,119,242	+		DZA65_RS19050	0.54	+1.6
4,119,271	+		DZA65_RS19050	0.57	+2.0
4,119,272	-		DZA65_RS19050	0.57	-2.6
4,119,272	-		DZA65_RS19050	0.57	+0.4
4,119,272	-		DZA65_RS19050	0.57	+0.0
4,119,292	+		DZA65_RS19050	0.58	+0.9
4,119,293	-		DZA65_RS19050	0.58	-1.1
4,119,355	+		DZA65_RS19050	0.64	+0.6
4,119,367	+		DZA65_RS19050	0.65	-0.2
4,119,368	-		DZA65_RS19050	0.65	-0.6
4,119,398	+		DZA65_RS19050	0.67	+0.6
4,119,399	-		DZA65_RS19050	0.67	+0.0
4,119,399	-		DZA65_RS19050	0.67	-0.1
4,119,399	-		DZA65_RS19050	0.67	-0.3
4,119,478	-		DZA65_RS19050	0.74	+0.4
4,119,539	+		DZA65_RS19050	0.79	+0.7
4,119,540	-		DZA65_RS19050	0.79	+0.3
4,119,540	-		DZA65_RS19050	0.79	-0.2
4,119,548	+		DZA65_RS19050	0.80	-0.1
4,119,548	+		DZA65_RS19050	0.80	+0.5
4,119,548	+		DZA65_RS19050	0.80	+0.0
4,119,549	-		DZA65_RS19050	0.80	-1.7