Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17145

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,702,413	-				-0.8
3,702,420	+				-1.9
3,702,420	+				-0.6
3,702,439	+				-0.3
3,702,439	+				-0.2
3,702,440	-				-0.0
3,702,440	-				+0.2
3,702,440	-				+0.0
3,702,440	-				-0.6
3,702,511	+				-0.4
3,702,511	+				-0.8
3,702,511	+				-1.2
3,702,511	+				+0.7
3,702,512	-		DZA65_RS17140	0.10	-0.1
3,702,512	-		DZA65_RS17140	0.10	-0.6
3,702,512	-		DZA65_RS17140	0.10	-0.9
3,702,512	-		DZA65_RS17140	0.10	-0.1
3,702,512	-		DZA65_RS17140	0.10	+0.8
3,702,512	-		DZA65_RS17140	0.10	-1.8
3,702,512	-		DZA65_RS17140	0.10	-1.3
3,702,552	+		DZA65_RS17140	0.14	+0.7
3,702,600	+		DZA65_RS17140	0.20	+0.5
3,702,600	+		DZA65_RS17140	0.20	+0.5
3,702,601	-		DZA65_RS17140	0.20	-0.7
3,702,601	-		DZA65_RS17140	0.20	+0.3
3,702,622	+		DZA65_RS17140	0.22	-0.7
3,702,622	+		DZA65_RS17140	0.22	-0.6
3,702,622	+		DZA65_RS17140	0.22	-0.4
3,702,622	+		DZA65_RS17140	0.22	-0.4
3,702,623	-		DZA65_RS17140	0.22	+0.4
3,702,623	-		DZA65_RS17140	0.22	+0.7
3,702,719	-		DZA65_RS17140	0.33	+0.9
3,702,719	-		DZA65_RS17140	0.33	+0.5
3,702,719	-		DZA65_RS17140	0.33	+0.2
3,702,721	+		DZA65_RS17140	0.33	+0.1
3,702,721	+		DZA65_RS17140	0.33	-0.7
3,702,721	+		DZA65_RS17140	0.33	-1.0
3,702,721	+		DZA65_RS17140	0.33	-0.3
3,702,721	+		DZA65_RS17140	0.33	+0.0
3,702,722	-		DZA65_RS17140	0.33	-0.2
3,702,722	-		DZA65_RS17140	0.33	+0.1
3,702,886	-		DZA65_RS17140	0.51	+0.2
3,702,886	-		DZA65_RS17140	0.51	+0.8
3,702,906	+		DZA65_RS17140	0.53	+1.0
3,702,906	+				+1.8
3,702,906	+		DZA65_RS17140	0.53	-0.7
3,702,906	+				+1.3
3,702,906	+		DZA65_RS17140	0.53	-0.6
3,702,907	-		DZA65_RS17140	0.53	+1.0
3,702,907	-		DZA65_RS17140	0.53	-0.2
3,702,909	+		DZA65_RS17140	0.54	+0.2
3,702,909	+		DZA65_RS17140	0.54	+0.0
3,702,909	+		DZA65_RS17140	0.54	+0.3
3,702,909	+		DZA65_RS17140	0.54	-1.3
3,702,910	-		DZA65_RS17140	0.54	+0.5
3,702,937	+		DZA65_RS17140	0.57	-0.2
3,702,938	-		DZA65_RS17140	0.57	-0.4
3,702,938	-		DZA65_RS17140	0.57	-0.1
3,702,986	+		DZA65_RS17140	0.62	-0.9
3,702,986	+		DZA65_RS17140	0.62	+1.0
3,702,986	+		DZA65_RS17140	0.62	-0.6
3,702,987	-		DZA65_RS17140	0.62	-0.7
3,702,987	-		DZA65_RS17140	0.62	+0.0
3,702,987	-		DZA65_RS17140	0.62	-0.6
3,703,034	+		DZA65_RS17140	0.67	+1.0
3,703,035	-		DZA65_RS17140	0.68	-0.4
3,703,035	-		DZA65_RS17140	0.68	-0.6
3,703,035	-		DZA65_RS17140	0.68	-0.2
3,703,036	+		DZA65_RS17140	0.68	-2.8
3,703,036	+		DZA65_RS17140	0.68	-0.5
3,703,037	-		DZA65_RS17140	0.68	-0.4
3,703,290	+				-1.1
3,703,290	+				+1.5
3,703,291	-				+1.7
3,703,291	-				+1.0
3,703,291	-				+0.6
3,703,304	+				-0.3
3,703,304	+				-0.4
3,703,305	-				+0.0
3,703,338	+				-1.4
3,703,338	+				+0.5
3,703,338	+				+0.0
3,703,339	-				-1.3
3,703,339	-				-0.0
3,703,339	-				-0.3
3,703,339	-				+0.7
3,703,339	-				-1.0
3,703,339	-				+0.4
3,703,339	-				+1.2
3,703,339	-				-1.1
3,703,339	-				+0.6
3,703,394	+				+0.1
3,703,394	+				+0.0
3,703,394	+				-1.6
3,703,395	-				+0.4
3,703,397	+				-0.7
3,703,397	+				+0.9
3,703,397	+				+0.4
3,703,397	+				+0.0
3,703,416	-				+2.0
3,703,433	-				+1.3
3,703,529	+				+0.2
3,703,529	+				+1.2
3,703,530	-				+1.0
3,703,530	-				-0.3
3,703,549	+		DZA65_RS17145	0.11	+1.4
3,703,550	-		DZA65_RS17145	0.11	+2.2
3,703,550	-		DZA65_RS17145	0.11	-0.4
3,703,550	-		DZA65_RS17145	0.11	-2.0
3,703,554	+		DZA65_RS17145	0.11	-0.4
3,703,584	+		DZA65_RS17145	0.13	-1.0
3,703,584	+		DZA65_RS17145	0.13	-0.1
3,703,832	+				+1.8
3,703,833	-		DZA65_RS17145	0.31	+0.0
3,703,911	+		DZA65_RS17145	0.37	-1.3
3,703,941	+		DZA65_RS17145	0.39	+0.6
3,704,190	+		DZA65_RS17145	0.56	+0.3
3,704,190	+		DZA65_RS17145	0.56	+1.0
3,704,208	+		DZA65_RS17145	0.58	-0.2
3,704,248	-		DZA65_RS17145	0.61	-0.3
3,704,424	+		DZA65_RS17145	0.73	+0.0
3,704,444	-		DZA65_RS17145	0.75	+1.0
3,704,501	+		DZA65_RS17145	0.79	+0.4
3,704,571	-		DZA65_RS17145	0.84	+0.7
3,704,650	+		DZA65_RS17145	0.89	+0.2
3,704,651	-		DZA65_RS17145	0.89	+1.0
3,704,651	-		DZA65_RS17145	0.89	-0.4
3,704,651	-		DZA65_RS17145	0.89	+0.3
3,704,810	+				-0.2
3,705,335	-				-0.4
3,705,362	-				-0.6
3,705,395	+				-0.2
3,705,395	+				+0.6
3,705,395	+				-1.3
3,705,395	+				-0.7
3,705,395	+				+0.1
3,705,395	+				+0.5
3,705,395	+				-0.6
3,705,395	+				-0.4
3,705,395	+				+1.1
3,705,395	+				-1.3
3,705,395	+				-0.7
3,705,395	+				-0.3
3,705,396	-				-2.0
3,705,396	-				-2.6
3,705,396	-				-2.1
3,705,396	-				-1.1
3,705,396	-				-1.6
3,705,396	-				-1.0
3,705,396	-				-1.3
3,705,396	-				-1.3
3,705,398	+				+0.0
3,705,398	+				-1.1
3,705,398	+				-0.1
3,705,398	+				+0.1
3,705,398	+				+1.4
3,705,398	+				+1.3
3,705,414	+				+0.9
3,705,446	+				-0.4
3,705,446	+				-2.0
3,705,447	-				-0.7
3,705,447	-				-1.6
3,705,447	-				-3.6
3,705,519	+				-0.4
3,705,519	+				-2.1
3,705,520	-				-1.0
3,705,546	+		DZA65_RS17155	0.12	-1.8
3,705,546	+		DZA65_RS17155	0.12	-1.8
3,705,547	-		DZA65_RS17155	0.13	-2.3
3,705,591	-		DZA65_RS17155	0.18	-2.0
3,705,598	+		DZA65_RS17155	0.19	-2.2
3,705,638	+		DZA65_RS17155	0.24	-0.5
3,705,639	-		DZA65_RS17155	0.24	-2.1
3,705,646	-		DZA65_RS17155	0.25	-0.7
3,705,661	+		DZA65_RS17155	0.27	-2.7
3,705,708	-		DZA65_RS17155	0.33	-2.4
3,705,773	+		DZA65_RS17155	0.41	-1.7
3,705,773	+		DZA65_RS17155	0.41	-0.6
3,705,774	-		DZA65_RS17155	0.41	-2.7
3,705,784	+		DZA65_RS17155	0.42	-1.9
3,705,784	+		DZA65_RS17155	0.42	-2.4
3,705,784	+		DZA65_RS17155	0.42	-0.1
3,705,784	+		DZA65_RS17155	0.42	-2.5
3,705,784	+		DZA65_RS17155	0.42	-2.9
3,705,784	+		DZA65_RS17155	0.42	-0.7
3,705,785	-		DZA65_RS17155	0.43	-1.8
3,705,785	-		DZA65_RS17155	0.43	-1.2
3,705,785	-		DZA65_RS17155	0.43	-0.8
3,705,785	-		DZA65_RS17155	0.43	-2.6