Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14060

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,013,616	-				+0.6
3,013,669	+		DZA65_RS14055	0.14	+0.5
3,013,669	+		DZA65_RS14055	0.14	+0.9
3,013,669	+		DZA65_RS14055	0.14	-0.5
3,013,670	-		DZA65_RS14055	0.14	-0.7
3,013,670	-		DZA65_RS14055	0.14	+0.8
3,013,671	+		DZA65_RS14055	0.14	+0.3
3,013,672	-		DZA65_RS14055	0.14	+1.8
3,013,685	-		DZA65_RS14055	0.16	+1.4
3,013,736	+		DZA65_RS14055	0.21	-0.6
3,013,736	+		DZA65_RS14055	0.21	-3.0
3,013,736	+		DZA65_RS14055	0.21	-0.4
3,013,737	-		DZA65_RS14055	0.21	+0.5
3,013,761	+		DZA65_RS14055	0.23	-0.2
3,013,762	-		DZA65_RS14055	0.23	+0.4
3,013,784	+		DZA65_RS14055	0.25	-0.7
3,013,784	+		DZA65_RS14055	0.25	-0.8
3,013,784	+		DZA65_RS14055	0.25	-0.2
3,013,785	-		DZA65_RS14055	0.25	+0.6
3,013,785	-		DZA65_RS14055	0.25	+1.3
3,013,785	-		DZA65_RS14055	0.25	+0.3
3,013,835	+		DZA65_RS14055	0.30	+0.9
3,013,842	+		DZA65_RS14055	0.31	+1.7
3,013,843	-		DZA65_RS14055	0.31	-0.4
3,013,891	+		DZA65_RS14055	0.35	-0.2
3,013,891	+		DZA65_RS14055	0.35	+0.6
3,013,892	-		DZA65_RS14055	0.35	+1.1
3,013,892	-		DZA65_RS14055	0.35	+1.3
3,013,892	-		DZA65_RS14055	0.35	+0.8
3,013,892	-		DZA65_RS14055	0.35	+1.0
3,013,892	-		DZA65_RS14055	0.35	+1.4
3,013,893	+		DZA65_RS14055	0.35	-0.6
3,013,893	+		DZA65_RS14055	0.35	-0.8
3,013,893	+				+2.6
3,013,893	+		DZA65_RS14055	0.35	-0.1
3,013,894	-		DZA65_RS14055	0.36	+1.2
3,013,894	-		DZA65_RS14055	0.36	-0.4
3,013,894	-		DZA65_RS14055	0.36	+0.7
3,013,942	+		DZA65_RS14055	0.40	+0.6
3,013,942	+		DZA65_RS14055	0.40	+0.4
3,013,942	+		DZA65_RS14055	0.40	-0.1
3,013,957	+		DZA65_RS14055	0.42	-0.4
3,013,957	+		DZA65_RS14055	0.42	+1.0
3,013,957	+		DZA65_RS14055	0.42	+1.4
3,013,958	-		DZA65_RS14055	0.42	+1.8
3,013,984	+		DZA65_RS14055	0.44	+0.0
3,013,985	-		DZA65_RS14055	0.44	+2.9
3,014,000	-		DZA65_RS14055	0.46	+1.7
3,014,000	-		DZA65_RS14055	0.46	+0.2
3,014,000	-		DZA65_RS14055	0.46	+0.6
3,014,000	-		DZA65_RS14055	0.46	+0.2
3,014,056	+		DZA65_RS14055	0.51	+0.6
3,014,056	+		DZA65_RS14055	0.51	+0.2
3,014,057	-		DZA65_RS14055	0.51	+0.8
3,014,068	+		DZA65_RS14055	0.52	+2.3
3,014,069	-		DZA65_RS14055	0.52	+1.5
3,014,108	-		DZA65_RS14055	0.56	+1.3
3,014,122	+		DZA65_RS14055	0.57	-0.1
3,014,122	+		DZA65_RS14055	0.57	+1.2
3,014,122	+		DZA65_RS14055	0.57	+0.9
3,014,123	-		DZA65_RS14055	0.57	+2.3
3,014,123	-		DZA65_RS14055	0.57	+1.5
3,014,125	+		DZA65_RS14055	0.57	+0.1
3,014,125	+		DZA65_RS14055	0.57	+1.0
3,014,126	-		DZA65_RS14055	0.58	+1.9
3,014,126	-		DZA65_RS14055	0.58	+2.5
3,014,126	-		DZA65_RS14055	0.58	+0.2
3,014,126	-		DZA65_RS14055	0.58	+1.4
3,014,140	+		DZA65_RS14055	0.59	+0.2
3,014,141	-		DZA65_RS14055	0.59	+1.5
3,014,217	+		DZA65_RS14055	0.66	+2.0
3,014,217	+		DZA65_RS14055	0.66	+0.2
3,014,217	+		DZA65_RS14055	0.66	+0.4
3,014,217	+		DZA65_RS14055	0.66	+0.2
3,014,217	+		DZA65_RS14055	0.66	+1.2
3,014,217	+		DZA65_RS14055	0.66	+0.1
3,014,217	+		DZA65_RS14055	0.66	-0.2
3,014,218	-		DZA65_RS14055	0.66	+1.6
3,014,218	-		DZA65_RS14055	0.66	+0.9
3,014,296	+		DZA65_RS14055	0.74	+1.2
3,014,297	-		DZA65_RS14055	0.74	+1.6
3,014,441	+		DZA65_RS14055	0.87	+0.6
3,014,442	-		DZA65_RS14055	0.88	+1.4
3,014,500	+				+0.5
3,014,500	+				+1.1
3,014,500	+				+0.8
3,014,501	-				+2.0
3,014,501	-				+1.9
3,014,501	-				+1.6
3,014,532	-				+1.7
3,014,552	+				+1.5
3,014,552	+				+0.5
3,014,552	+				+0.9
3,014,555	+				-0.2
3,014,556	-				+0.3
3,014,556	-				+1.0
3,014,566	+				+0.8
3,014,573	+				+0.9
3,014,666	-		DZA65_RS14060	0.11	-0.5
3,014,666	-		DZA65_RS14060	0.11	-1.9
3,014,666	-		DZA65_RS14060	0.11	-0.2
3,014,680	-		DZA65_RS14060	0.12	-1.4
3,014,818	+		DZA65_RS14060	0.28	+0.1
3,014,818	+		DZA65_RS14060	0.28	-1.3
3,014,818	+		DZA65_RS14060	0.28	-0.0
3,014,819	-		DZA65_RS14060	0.28	-0.4
3,014,819	-		DZA65_RS14060	0.28	+0.8
3,014,819	-		DZA65_RS14060	0.28	-0.1
3,014,859	+		DZA65_RS14060	0.33	+0.5
3,014,859	+		DZA65_RS14060	0.33	-0.2
3,014,860	-		DZA65_RS14060	0.33	+0.6
3,014,860	-		DZA65_RS14060	0.33	-1.6
3,014,878	+		DZA65_RS14060	0.35	+0.3
3,014,879	-		DZA65_RS14060	0.35	+0.2
3,014,934	-		DZA65_RS14060	0.41	-0.5
3,014,934	-		DZA65_RS14060	0.41	+1.0
3,014,956	+		DZA65_RS14060	0.44	+1.6
3,014,967	+		DZA65_RS14060	0.45	-2.6
3,014,968	-		DZA65_RS14060	0.45	-2.2
3,014,968	-		DZA65_RS14060	0.45	+0.8
3,014,997	+		DZA65_RS14060	0.49	+0.3
3,014,997	+		DZA65_RS14060	0.49	-0.0
3,014,997	+		DZA65_RS14060	0.49	+2.2
3,014,998	-		DZA65_RS14060	0.49	-0.7
3,014,998	-		DZA65_RS14060	0.49	+0.8
3,014,998	-		DZA65_RS14060	0.49	+0.3
3,014,998	-		DZA65_RS14060	0.49	+0.3
3,015,014	+		DZA65_RS14060	0.51	+1.5
3,015,014	+		DZA65_RS14060	0.51	+0.5
3,015,014	+		DZA65_RS14060	0.51	+0.2
3,015,015	-		DZA65_RS14060	0.51	-1.0
3,015,015	-		DZA65_RS14060	0.51	-0.1
3,015,178	-		DZA65_RS14060	0.69	+1.4
3,015,180	+		DZA65_RS14060	0.70	-0.7
3,015,180	+		DZA65_RS14060	0.70	-0.1
3,015,181	-		DZA65_RS14060	0.70	+1.1
3,015,181	-		DZA65_RS14060	0.70	+0.2
3,015,230	+		DZA65_RS14060	0.75	-0.0
3,015,284	+		DZA65_RS14060	0.82	+1.5
3,015,285	-		DZA65_RS14060	0.82	-0.6
3,015,300	+		DZA65_RS14060	0.83	-1.0
3,015,301	-		DZA65_RS14060	0.84	-0.6
3,015,332	+		DZA65_RS14060	0.87	+0.3
3,015,332	+		DZA65_RS14060	0.87	-0.7
3,015,332	+		DZA65_RS14060	0.87	+0.0
3,015,332	+		DZA65_RS14060	0.87	-0.2
3,015,332	+		DZA65_RS14060	0.87	+0.6
3,015,336	+		DZA65_RS14060	0.88	+0.1
3,015,336	+		DZA65_RS14060	0.88	+0.2
3,015,336	+		DZA65_RS14060	0.88	-0.2
3,015,336	+		DZA65_RS14060	0.88	-0.1
3,015,336	+		DZA65_RS14060	0.88	+1.4
3,015,337	-		DZA65_RS14060	0.88	-0.5
3,015,337	-		DZA65_RS14060	0.88	-0.9
3,015,337	-		DZA65_RS14060	0.88	+1.6
3,015,337	-		DZA65_RS14060	0.88	-0.7
3,015,337	-		DZA65_RS14060	0.88	-0.9
3,015,337	-		DZA65_RS14060	0.88	+0.4
3,015,337	-		DZA65_RS14060	0.88	-0.5
3,015,337	-		DZA65_RS14060	0.88	-0.8
3,015,337	-		DZA65_RS14060	0.88	+0.6
3,015,337	-		DZA65_RS14060	0.88	-0.2
3,015,337	-		DZA65_RS14060	0.88	+0.1
3,015,337	-		DZA65_RS14060	0.88	+0.2
3,015,337	-		DZA65_RS14060	0.88	-0.4
3,015,402	+				+0.3
3,015,402	+				+0.8
3,015,403	-				-1.7
3,015,403	-				-1.2
3,015,408	+				-0.8
3,015,408	+				+0.2
3,015,408	+				+0.4
3,015,409	-				-0.5
3,015,409	-				+0.9
3,015,409	-				+1.1
3,015,466	+				-0.2
3,015,467	-				+0.1
3,015,477	-				+1.9
3,015,502	+				-0.3
3,015,503	-				-0.7
3,015,503	-				-0.1
3,015,504	+				+0.1
3,015,504	+				+0.1
3,015,504	+				-0.6
3,015,505	-				+0.2
3,015,505	-				+0.4
3,015,505	-				-0.9
3,015,505	-				-0.2
3,015,505	-				-2.2
3,015,505	-				+0.4
3,015,505	-				-1.0
3,015,505	-				-0.0
3,015,508	+				+0.0
3,015,508	+				-0.8
3,015,528	-				-0.0
3,015,546	-				+0.4
3,015,573	+				-0.7
3,015,574	-				-0.7
3,015,616	+				-0.2
3,015,641	+				-0.0
3,015,641	+				+1.0
3,015,642	-				+0.8
3,015,703	+				-2.2
3,015,704	-				+0.1
3,015,715	-				-0.4
3,015,770	+				+0.2
3,015,777	-				-0.8
3,015,784	+				-0.1
3,015,784	+				-0.2
3,015,785	-				+0.2
3,015,785	-				-0.1
3,015,785	-				+0.8
3,015,785	-				+0.8
3,015,796	+				+0.5
3,015,797	-				-0.2
3,015,797	-				-0.1
3,015,797	-				-0.5
3,015,800	+				+0.1
3,015,800	+				+0.3
3,015,800	+				+0.3
3,015,801	-				+0.4
3,015,801	-				-0.5
3,015,801	-				-1.2
3,015,803	-				-0.0
3,015,831	-				-0.4
3,015,835	-				+0.3
3,015,914	+				-0.5
3,015,915	-				+0.4
3,015,920	+				-0.2
3,015,948	+				+0.8
3,015,948	+				-0.0
3,015,949	-				+0.3
3,015,968	+				-1.7
3,015,968	+				-1.6
3,015,968	+				-0.1
3,015,969	-				-0.1
3,016,002	+				+0.2
3,016,003	-				-0.5
3,016,003	-				+0.0
3,016,055	+				+1.2
3,016,055	+				-0.6
3,016,101	+				-0.1
3,016,101	+				+0.5
3,016,102	-				-0.6
3,016,102	-				-0.1
3,016,102	-				+0.2
3,016,146	+				+0.1
3,016,146	+				+0.2
3,016,174	+				-0.1
3,016,175	-				-0.5
3,016,224	-				-2.0
3,016,224	-				-0.1
3,016,328	+		DZA65_RS14065	0.11	+0.2