Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14040

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,010,110	+		DZA65_RS14035	0.54	-1.7
3,010,111	-		DZA65_RS14035	0.54	+0.4
3,010,145	+		DZA65_RS14035	0.56	-0.8
3,010,146	-		DZA65_RS14035	0.56	+0.1
3,010,146	-		DZA65_RS14035	0.56	+0.4
3,010,146	-		DZA65_RS14035	0.56	+1.2
3,010,151	+		DZA65_RS14035	0.56	+0.6
3,010,199	+		DZA65_RS14035	0.58	+0.0
3,010,199	+		DZA65_RS14035	0.58	-0.7
3,010,199	+		DZA65_RS14035	0.58	-0.7
3,010,200	-		DZA65_RS14035	0.58	+0.9
3,010,200	-		DZA65_RS14035	0.58	+0.4
3,010,200	-		DZA65_RS14035	0.58	+0.5
3,010,200	-		DZA65_RS14035	0.58	+1.1
3,010,200	-		DZA65_RS14035	0.58	+0.1
3,010,200	-		DZA65_RS14035	0.58	+0.4
3,010,211	+		DZA65_RS14035	0.59	-0.8
3,010,211	+		DZA65_RS14035	0.59	-0.6
3,010,269	+		DZA65_RS14035	0.61	+0.7
3,010,269	+		DZA65_RS14035	0.61	+1.1
3,010,346	+		DZA65_RS14035	0.65	+0.8
3,010,346	+		DZA65_RS14035	0.65	+0.6
3,010,346	+		DZA65_RS14035	0.65	-0.8
3,010,347	-		DZA65_RS14035	0.65	-0.2
3,010,347	-		DZA65_RS14035	0.65	+0.2
3,010,347	-		DZA65_RS14035	0.65	+0.9
3,010,347	-		DZA65_RS14035	0.65	+0.2
3,010,348	+		DZA65_RS14035	0.65	+0.4
3,010,348	+		DZA65_RS14035	0.65	+1.1
3,010,348	+		DZA65_RS14035	0.65	-0.0
3,010,348	+		DZA65_RS14035	0.65	+0.9
3,010,348	+		DZA65_RS14035	0.65	-0.8
3,010,348	+		DZA65_RS14035	0.65	+0.9
3,010,348	+		DZA65_RS14035	0.65	+0.9
3,010,348	+		DZA65_RS14035	0.65	-0.7
3,010,349	-		DZA65_RS14035	0.65	+0.8
3,010,349	-		DZA65_RS14035	0.65	+0.5
3,010,349	-		DZA65_RS14035	0.65	-0.2
3,010,349	-		DZA65_RS14035	0.65	+0.4
3,010,349	-		DZA65_RS14035	0.65	+0.9
3,010,376	+		DZA65_RS14035	0.67	+0.3
3,010,376	+		DZA65_RS14035	0.67	+0.6
3,010,376	+		DZA65_RS14035	0.67	+0.8
3,010,376	+		DZA65_RS14035	0.67	+0.5
3,010,376	+		DZA65_RS14035	0.67	+0.5
3,010,376	+		DZA65_RS14035	0.67	+0.5
3,010,377	-		DZA65_RS14035	0.67	+0.4
3,010,377	-				+0.8
3,010,377	-		DZA65_RS14035	0.67	-0.2
3,010,377	-		DZA65_RS14035	0.67	+0.5
3,010,418	+		DZA65_RS14035	0.69	+0.5
3,010,418	+		DZA65_RS14035	0.69	-0.3
3,010,418	+		DZA65_RS14035	0.69	+0.8
3,010,419	-		DZA65_RS14035	0.69	+0.2
3,010,467	-		DZA65_RS14035	0.71	+0.6
3,010,489	+		DZA65_RS14035	0.72	+0.8
3,010,489	+		DZA65_RS14035	0.72	-0.0
3,010,586	+		DZA65_RS14035	0.77	+0.6
3,010,587	-		DZA65_RS14035	0.77	-0.2
3,010,595	+		DZA65_RS14035	0.77	-0.2
3,010,596	-		DZA65_RS14035	0.77	+1.8
3,010,596	-		DZA65_RS14035	0.77	+0.8
3,010,596	-		DZA65_RS14035	0.77	+0.2
3,010,596	-		DZA65_RS14035	0.77	-0.8
3,010,596	-		DZA65_RS14035	0.77	+0.5
3,010,596	-		DZA65_RS14035	0.77	+0.2
3,010,652	+		DZA65_RS14035	0.80	+0.1
3,010,658	+		DZA65_RS14035	0.80	-0.2
3,010,658	+		DZA65_RS14035	0.80	+0.8
3,010,658	+		DZA65_RS14035	0.80	+0.8
3,010,659	-		DZA65_RS14035	0.80	+0.2
3,010,659	-		DZA65_RS14035	0.80	+0.4
3,010,659	-		DZA65_RS14035	0.80	+0.1
3,010,659	-		DZA65_RS14035	0.80	+0.1
3,010,679	+		DZA65_RS14035	0.81	+0.4
3,010,803	+		DZA65_RS14035	0.87	-0.3
3,010,803	+		DZA65_RS14035	0.87	+0.8
3,010,803	+		DZA65_RS14035	0.87	-0.1
3,010,804	-		DZA65_RS14035	0.87	-0.0
3,010,804	-		DZA65_RS14035	0.87	-0.8
3,010,804	-		DZA65_RS14035	0.87	-1.2
3,010,804	-		DZA65_RS14035	0.87	+0.3
3,010,804	-		DZA65_RS14035	0.87	-0.9
3,010,829	+		DZA65_RS14035	0.88	+0.8
3,010,829	+		DZA65_RS14035	0.88	+0.2
3,010,829	+		DZA65_RS14035	0.88	+0.1
3,010,830	-		DZA65_RS14035	0.88	-0.6
3,010,904	+				+0.3
3,010,904	+				+1.8
3,010,905	-				+0.2
3,010,922	+				-0.2
3,010,928	+				+0.1
3,010,929	-				-0.5
3,010,989	+				-0.7
3,010,989	+				-1.5
3,011,033	+				-0.0
3,011,033	+				+1.7
3,011,033	+				+0.9
3,011,034	-				-0.2
3,011,034	-				+0.4
3,011,034	-				+0.7
3,011,034	-				+0.3
3,011,066	+				+0.3
3,011,131	-				+0.0
3,011,137	+				-0.5
3,011,174	+				+0.0
3,011,174	+				+0.7
3,011,175	-				+0.2
3,011,207	+		DZA65_RS14040	0.12	+0.3
3,011,207	+		DZA65_RS14040	0.12	+1.0
3,011,207	+		DZA65_RS14040	0.12	-0.7
3,011,207	+		DZA65_RS14040	0.12	+0.4
3,011,207	+		DZA65_RS14040	0.12	+0.4
3,011,207	+		DZA65_RS14040	0.12	+0.6
3,011,207	+		DZA65_RS14040	0.12	-0.2
3,011,207	+		DZA65_RS14040	0.12	-0.0
3,011,207	+		DZA65_RS14040	0.12	-0.7
3,011,207	+		DZA65_RS14040	0.12	+0.9
3,011,207	+		DZA65_RS14040	0.12	+1.1
3,011,207	+		DZA65_RS14040	0.12	+0.8
3,011,207	+		DZA65_RS14040	0.12	+0.4
3,011,207	+		DZA65_RS14040	0.12	+0.3
3,011,208	-		DZA65_RS14040	0.12	+1.0
3,011,208	-		DZA65_RS14040	0.12	-0.8
3,011,208	-		DZA65_RS14040	0.12	+0.8
3,011,208	-		DZA65_RS14040	0.12	-0.8
3,011,208	-		DZA65_RS14040	0.12	+1.0
3,011,208	-		DZA65_RS14040	0.12	+1.1
3,011,208	-		DZA65_RS14040	0.12	+0.4
3,011,208	-		DZA65_RS14040	0.12	-3.4
3,011,208	-		DZA65_RS14040	0.12	-0.1
3,011,208	-		DZA65_RS14040	0.12	+0.6
3,011,209	+		DZA65_RS14040	0.12	+0.5
3,011,210	-		DZA65_RS14040	0.13	+0.4
3,011,210	-		DZA65_RS14040	0.13	-1.7
3,011,210	-		DZA65_RS14040	0.13	+1.0
3,011,210	-		DZA65_RS14040	0.13	+0.5
3,011,210	-		DZA65_RS14040	0.13	+0.9
3,011,210	-		DZA65_RS14040	0.13	+2.0
3,011,210	-		DZA65_RS14040	0.13	+0.4
3,011,210	-		DZA65_RS14040	0.13	+0.9
3,011,210	-		DZA65_RS14040	0.13	+0.2
3,011,241	+		DZA65_RS14040	0.15	+1.5
3,011,241	+		DZA65_RS14040	0.15	+0.5
3,011,289	+		DZA65_RS14040	0.19	-0.5
3,011,289	+		DZA65_RS14040	0.19	-0.4
3,011,326	+		DZA65_RS14040	0.23	-0.5
3,011,326	+		DZA65_RS14040	0.23	+0.4
3,011,327	-		DZA65_RS14040	0.23	-0.1
3,011,381	+		DZA65_RS14040	0.27	+0.2
3,011,381	+		DZA65_RS14040	0.27	+1.2
3,011,381	+		DZA65_RS14040	0.27	-1.2
3,011,381	+		DZA65_RS14040	0.27	+0.3
3,011,381	+		DZA65_RS14040	0.27	+0.7
3,011,381	+		DZA65_RS14040	0.27	-0.1
3,011,381	+		DZA65_RS14040	0.27	+0.3
3,011,381	+		DZA65_RS14040	0.27	+2.4
3,011,382	-		DZA65_RS14040	0.28	+0.4
3,011,382	-		DZA65_RS14040	0.28	+0.2
3,011,382	-		DZA65_RS14040	0.28	+0.8
3,011,382	-		DZA65_RS14040	0.28	+0.8
3,011,382	-		DZA65_RS14040	0.28	+0.4
3,011,399	+		DZA65_RS14040	0.29	+1.0
3,011,400	-				+1.2
3,011,422	+		DZA65_RS14040	0.31	+0.4
3,011,422	+		DZA65_RS14040	0.31	+0.1
3,011,422	+		DZA65_RS14040	0.31	+0.1
3,011,422	+		DZA65_RS14040	0.31	+0.9
3,011,422	+		DZA65_RS14040	0.31	-1.0
3,011,423	-		DZA65_RS14040	0.31	-0.1
3,011,423	-		DZA65_RS14040	0.31	+0.6
3,011,423	-		DZA65_RS14040	0.31	+0.8
3,011,423	-		DZA65_RS14040	0.31	-0.7
3,011,423	-		DZA65_RS14040	0.31	-0.2
3,011,423	-		DZA65_RS14040	0.31	+1.1
3,011,525	+		DZA65_RS14040	0.40	-2.6
3,011,553	+		DZA65_RS14040	0.42	+0.6
3,011,554	-		DZA65_RS14040	0.42	+0.4
3,011,565	+		DZA65_RS14040	0.43	+0.8
3,011,566	-		DZA65_RS14040	0.43	+0.5
3,011,569	-		DZA65_RS14040	0.44	-0.1
3,011,569	-		DZA65_RS14040	0.44	+0.3
3,011,578	+		DZA65_RS14040	0.45	-1.2
3,011,578	+		DZA65_RS14040	0.45	+0.4
3,011,578	+		DZA65_RS14040	0.45	+1.0
3,011,579	-		DZA65_RS14040	0.45	+0.8
3,011,579	-		DZA65_RS14040	0.45	+1.0
3,011,607	+		DZA65_RS14040	0.47	+1.0
3,011,608	-		DZA65_RS14040	0.47	+0.6
3,011,668	+		DZA65_RS14040	0.52	-0.1
3,011,701	+		DZA65_RS14040	0.55	-0.1
3,011,701	+		DZA65_RS14040	0.55	-0.1
3,011,701	+		DZA65_RS14040	0.55	+0.9
3,011,701	+		DZA65_RS14040	0.55	-0.9
3,011,701	+		DZA65_RS14040	0.55	-0.2
3,011,701	+		DZA65_RS14040	0.55	+0.8
3,011,701	+		DZA65_RS14040	0.55	+0.9
3,011,702	-		DZA65_RS14040	0.55	+0.2
3,011,702	-		DZA65_RS14040	0.55	-0.4
3,011,702	-		DZA65_RS14040	0.55	+0.1
3,011,702	-		DZA65_RS14040	0.55	+0.6
3,011,702	-		DZA65_RS14040	0.55	+0.5
3,011,702	-		DZA65_RS14040	0.55	+0.5
3,011,702	-		DZA65_RS14040	0.55	-0.2
3,011,702	-		DZA65_RS14040	0.55	+0.3
3,011,702	-		DZA65_RS14040	0.55	+0.1
3,011,709	+		DZA65_RS14040	0.56	+0.7
3,011,709	+		DZA65_RS14040	0.56	+0.9
3,011,710	-		DZA65_RS14040	0.56	+1.3
3,011,710	-		DZA65_RS14040	0.56	+1.1
3,011,718	+		DZA65_RS14040	0.57	+0.9
3,011,718	+		DZA65_RS14040	0.57	+0.8
3,011,719	-		DZA65_RS14040	0.57	-0.0
3,011,719	-		DZA65_RS14040	0.57	-0.8
3,011,719	-		DZA65_RS14040	0.57	+1.2
3,011,739	+		DZA65_RS14040	0.59	+0.7
3,011,739	+		DZA65_RS14040	0.59	+0.5
3,011,739	+		DZA65_RS14040	0.59	+1.3
3,011,739	+		DZA65_RS14040	0.59	+0.8
3,011,739	+		DZA65_RS14040	0.59	+0.7
3,011,739	+		DZA65_RS14040	0.59	+0.4
3,011,740	-		DZA65_RS14040	0.59	+0.3
3,011,740	-		DZA65_RS14040	0.59	+2.0
3,011,742	+		DZA65_RS14040	0.59	+1.2
3,011,742	+		DZA65_RS14040	0.59	+0.8
3,011,742	+		DZA65_RS14040	0.59	+2.0
3,011,743	-		DZA65_RS14040	0.59	+1.0
3,011,743	-		DZA65_RS14040	0.59	-0.8
3,011,743	-		DZA65_RS14040	0.59	+0.2
3,011,743	-		DZA65_RS14040	0.59	+0.5
3,011,743	-		DZA65_RS14040	0.59	+1.2
3,011,769	+		DZA65_RS14040	0.61	-0.8
3,011,770	-		DZA65_RS14040	0.61	+0.5
3,011,770	-		DZA65_RS14040	0.61	-0.4
3,011,770	-		DZA65_RS14040	0.61	+0.6
3,011,770	-		DZA65_RS14040	0.61	+0.8
3,011,775	+		DZA65_RS14040	0.62	+0.0
3,011,775	+		DZA65_RS14040	0.62	+0.8
3,011,776	-		DZA65_RS14040	0.62	+1.1
3,011,776	-		DZA65_RS14040	0.62	+0.8
3,011,791	+		DZA65_RS14040	0.63	+0.3
3,011,791	+		DZA65_RS14040	0.63	+0.2
3,011,792	-		DZA65_RS14040	0.63	-0.3
3,011,792	-		DZA65_RS14040	0.63	+0.6
3,011,808	+		DZA65_RS14040	0.64	+0.1
3,011,808	+		DZA65_RS14040	0.64	+0.5
3,011,808	+		DZA65_RS14040	0.64	-1.6
3,011,809	-		DZA65_RS14040	0.65	+0.5
3,011,809	-		DZA65_RS14040	0.65	+0.8
3,011,809	-		DZA65_RS14040	0.65	+0.3
3,011,809	-		DZA65_RS14040	0.65	+0.4
3,011,824	+		DZA65_RS14040	0.66	+1.6
3,011,853	+		DZA65_RS14040	0.68	-0.8
3,011,853	+		DZA65_RS14040	0.68	+0.7
3,011,854	-		DZA65_RS14040	0.68	+0.5
3,011,891	-		DZA65_RS14040	0.72	+0.7
3,011,926	+		DZA65_RS14040	0.75	+1.2
3,011,926	+		DZA65_RS14040	0.75	+0.3
3,011,926	+		DZA65_RS14040	0.75	+1.4
3,011,926	+		DZA65_RS14040	0.75	+1.3
3,011,927	-		DZA65_RS14040	0.75	+0.9
3,011,927	-		DZA65_RS14040	0.75	+0.6
3,011,927	-		DZA65_RS14040	0.75	-0.2
3,011,927	-		DZA65_RS14040	0.75	+0.5
3,011,927	-		DZA65_RS14040	0.75	-0.5
3,011,931	+		DZA65_RS14040	0.75	+0.6
3,011,932	-		DZA65_RS14040	0.75	+0.5
3,011,932	-		DZA65_RS14040	0.75	+0.2
3,012,009	+		DZA65_RS14040	0.82	+0.2
3,012,010	-		DZA65_RS14040	0.82	-0.1
3,012,010	-		DZA65_RS14040	0.82	+0.7
3,012,010	-		DZA65_RS14040	0.82	+0.4
3,012,039	+		DZA65_RS14040	0.85	-1.7
3,012,039	+		DZA65_RS14040	0.85	+0.8
3,012,040	-		DZA65_RS14040	0.85	+0.3
3,012,061	-		DZA65_RS14040	0.86	+0.7
3,012,105	+				+0.5
3,012,105	+				-0.2
3,012,105	+				+0.2
3,012,105	+				+0.8
3,012,106	-				+0.5
3,012,106	-				+0.8
3,012,106	-				+0.3
3,012,106	-				+0.7
3,012,106	-				+0.5
3,012,106	-				+0.1
3,012,106	-				+0.3
3,012,218	-				+0.7
3,012,247	+				+0.3
3,012,247	+				+2.0
3,012,247	+				+0.6
3,012,247	+				+0.2
3,012,247	+				-0.0
3,012,247	+				+0.4
3,012,248	-				-0.7
3,012,248	-				+1.6
3,012,253	+				+0.0
3,012,253	+				-0.3
3,012,253	+				+0.6
3,012,253	+				+0.4
3,012,254	-				+0.7
3,012,254	-				-1.0
3,012,254	-				+1.9
3,012,254	-				+0.2
3,012,255	+				+0.5
3,012,255	+				-0.7
3,012,255	+				+1.3
3,012,256	-				+0.4
3,012,256	-				-0.1
3,012,263	+				+0.8
3,012,263	+				+0.1
3,012,263	+				+1.1
3,012,263	+				+0.2
3,012,263	+				+0.0
3,012,263	+				-2.9
3,012,264	-				-0.1
3,012,264	-				+1.2
3,012,264	-				-1.6
3,012,264	-				-0.8
3,012,311	+				+1.0
3,012,319	+				+0.4
3,012,319	+				-0.1
3,012,320	-				-0.2
3,012,323	+				+0.6
3,012,324	-				+1.6
3,012,324	-				-0.2
3,012,324	-				+0.3
3,012,328	+				+1.8
3,012,329	-				-0.4
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