Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09885

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,083,449	+				-0.2
2,083,551	-		DZA65_RS09875	0.30	+0.7
2,083,590	+		DZA65_RS09875	0.48	+0.2
2,083,614	+		DZA65_RS09875	0.59	+0.3
2,083,627	+		DZA65_RS09875	0.64	-1.2
2,083,627	+		DZA65_RS09875	0.64	-0.9
2,083,627	+		DZA65_RS09875	0.64	-0.7
2,083,628	-		DZA65_RS09875	0.65	-0.5
2,083,654	+		DZA65_RS09875	0.77	+0.7
2,083,654	+		DZA65_RS09875	0.77	-0.8
2,083,655	-		DZA65_RS09875	0.77	-1.0
2,083,655	-		DZA65_RS09875	0.77	-0.4
2,083,687	+				+0.7
2,083,688	-				+0.7
2,083,688	-				-0.2
2,083,688	-				+0.9
2,083,688	-				+0.3
2,083,693	+				-0.1
2,083,693	+				-0.0
2,083,693	+				+1.4
2,083,705	+				+0.8
2,083,705	+				+1.0
2,083,706	-				+0.3
2,083,706	-				-0.3
2,083,706	-				+1.5
2,083,706	-				-0.5
2,083,706	-				-0.1
2,083,706	-				-0.9
2,083,706	-				+0.0
2,083,706	-				-0.4
2,083,706	-				-1.4
2,083,706	-				-0.3
2,083,706	-				-1.1
2,083,706	-				+0.7
2,083,706	-				+0.4
2,083,706	-				+0.7
2,083,706	-				-0.2
2,083,706	-				+0.2
2,083,706	-				-0.6
2,083,735	+				+0.5
2,083,736	-				-0.1
2,083,736	-				-0.1
2,083,796	+				+0.7
2,083,796	+				-1.1
2,083,796	+				+0.8
2,083,796	+				+0.8
2,083,797	-				-0.2
2,083,797	-				-0.0
2,083,797	-				+0.8
2,083,876	+				+1.4
2,083,877	-				+0.1
2,083,895	+				+0.5
2,083,908	-				+0.7
2,083,958	+				+0.2
2,083,958	+				+1.1
2,083,958	+				-0.2
2,083,959	-				-1.3
2,083,963	+				+0.7
2,083,963	+				+0.4
2,083,964	-				-1.1
2,084,001	+				-0.1
2,084,001	+				+0.5
2,084,002	-				+0.7
2,084,002	-				-2.1
2,084,006	-				-1.5
2,084,006	-				-1.1
2,084,006	-				-1.2
2,084,006	-				-0.3
2,084,023	+				+0.7
2,084,024	-				-0.7
2,084,040	+				-0.8
2,084,040	+				+0.9
2,084,041	-				-0.2
2,084,041	-				-0.7
2,084,041	-				-1.9
2,084,044	-				+0.3
2,084,071	-		DZA65_RS09880	0.13	+0.3
2,084,071	-		DZA65_RS09880	0.13	+0.9
2,084,081	-		DZA65_RS09880	0.16	-0.3
2,084,110	+		DZA65_RS09880	0.25	-0.6
2,084,110	+		DZA65_RS09880	0.25	+0.2
2,084,110	+		DZA65_RS09880	0.25	+0.7
2,084,111	-		DZA65_RS09880	0.26	-0.7
2,084,112	+		DZA65_RS09880	0.26	-0.4
2,084,112	+		DZA65_RS09880	0.26	-1.2
2,084,120	+		DZA65_RS09880	0.28	-0.6
2,084,120	+		DZA65_RS09880	0.28	+0.7
2,084,120	+		DZA65_RS09880	0.28	-0.3
2,084,124	+		DZA65_RS09880	0.30	-1.7
2,084,125	-		DZA65_RS09880	0.30	-0.4
2,084,125	-		DZA65_RS09880	0.30	-0.0
2,084,125	-		DZA65_RS09880	0.30	+1.5
2,084,138	-		DZA65_RS09880	0.34	-0.3
2,084,138	-		DZA65_RS09880	0.34	-1.7
2,084,138	-		DZA65_RS09880	0.34	+0.2
2,084,138	-		DZA65_RS09880	0.34	-0.1
2,084,138	-		DZA65_RS09880	0.34	-2.3
2,084,157	+		DZA65_RS09880	0.40	-0.2
2,084,185	+		DZA65_RS09880	0.49	-0.6
2,084,186	-				+2.3
2,084,186	-		DZA65_RS09880	0.49	-0.7
2,084,190	+		DZA65_RS09880	0.50	-0.2
2,084,191	-		DZA65_RS09880	0.50	+0.7
2,084,217	+		DZA65_RS09880	0.59	-0.1
2,084,218	-		DZA65_RS09880	0.59	+0.9
2,084,353	-				-2.0
2,084,353	-				-0.1
2,084,353	-				+0.1
2,084,357	+				-0.4
2,084,363	-				-1.3
2,084,363	-				-0.1
2,084,379	-				-1.3
2,084,379	-				+0.0
2,084,451	-				+0.3
2,084,451	-				+0.6
2,084,467	+				-0.9
2,084,467	+				+0.1
2,084,468	-				+1.3
2,084,468	-				+0.4
2,084,468	-				+0.7
2,084,480	-				-0.1
2,084,519	+				+0.4
2,084,519	+				+0.1
2,084,519	+				-0.8
2,084,520	-				-0.6
2,084,742	+		DZA65_RS09885	0.16	-0.3
2,084,743	-		DZA65_RS09885	0.16	-0.9
2,084,879	+		DZA65_RS09885	0.22	-1.3
2,085,111	+		DZA65_RS09885	0.32	-1.7
2,085,111	+		DZA65_RS09885	0.32	-1.1
2,085,111	+		DZA65_RS09885	0.32	+0.2
2,085,150	+		DZA65_RS09885	0.34	-0.7
2,085,176	+		DZA65_RS09885	0.35	-0.9
2,085,177	-				+0.7
2,085,207	-		DZA65_RS09885	0.36	-1.1
2,085,207	-		DZA65_RS09885	0.36	+0.4
2,085,245	+		DZA65_RS09885	0.38	-0.9
2,085,338	+		DZA65_RS09885	0.42	-0.4
2,085,345	+		DZA65_RS09885	0.42	+1.0
2,085,346	-		DZA65_RS09885	0.42	-2.2
2,085,362	+		DZA65_RS09885	0.43	+1.3
2,085,362	+		DZA65_RS09885	0.43	-0.7
2,085,363	-		DZA65_RS09885	0.43	-0.2
2,085,363	-		DZA65_RS09885	0.43	-0.6
2,085,363	-		DZA65_RS09885	0.43	-1.5
2,085,363	-		DZA65_RS09885	0.43	-1.7
2,085,445	+		DZA65_RS09885	0.47	-0.2
2,085,445	+		DZA65_RS09885	0.47	-1.4
2,085,445	+		DZA65_RS09885	0.47	-0.7
2,085,446	-		DZA65_RS09885	0.47	-0.3
2,085,446	-		DZA65_RS09885	0.47	+0.3
2,085,446	-		DZA65_RS09885	0.47	+0.1
2,085,468	+		DZA65_RS09885	0.48	+2.5
2,085,469	-		DZA65_RS09885	0.48	-1.9
2,085,469	-		DZA65_RS09885	0.48	-1.2
2,085,494	+		DZA65_RS09885	0.49	-0.7
2,085,537	+		DZA65_RS09885	0.51	-1.1
2,085,537	+		DZA65_RS09885	0.51	-0.3
2,085,537	+		DZA65_RS09885	0.51	+0.3
2,085,537	+		DZA65_RS09885	0.51	+0.8
2,085,537	+		DZA65_RS09885	0.51	+0.0
2,085,537	+		DZA65_RS09885	0.51	+0.3
2,085,537	+		DZA65_RS09885	0.51	-0.8
2,085,538	-		DZA65_RS09885	0.51	+0.7
2,085,538	-		DZA65_RS09885	0.51	-0.0
2,085,538	-				+0.3
2,085,542	+		DZA65_RS09885	0.51	-0.9
2,085,543	-		DZA65_RS09885	0.51	+0.6
2,085,543	-		DZA65_RS09885	0.51	-1.1
2,085,726	-		DZA65_RS09885	0.59	+0.8
2,085,767	+				-1.3
2,085,767	+		DZA65_RS09885	0.61	+0.3
2,085,768	-		DZA65_RS09885	0.61	-0.6
2,085,935	+		DZA65_RS09885	0.68	-1.2
2,085,935	+		DZA65_RS09885	0.68	+1.0
2,085,936	-		DZA65_RS09885	0.68	-0.6
2,085,936	-		DZA65_RS09885	0.68	-1.4
2,085,936	-		DZA65_RS09885	0.68	-0.2
2,085,936	-		DZA65_RS09885	0.68	-0.3
2,085,936	-				-0.7
2,085,936	-		DZA65_RS09885	0.68	-1.5
2,085,936	-		DZA65_RS09885	0.68	-0.7
2,085,945	+		DZA65_RS09885	0.69	-0.1
2,085,946	-		DZA65_RS09885	0.69	+0.7
2,085,946	-		DZA65_RS09885	0.69	-1.5
2,085,993	+		DZA65_RS09885	0.71	+0.3
2,086,003	-		DZA65_RS09885	0.71	-0.3
2,086,217	+		DZA65_RS09885	0.81	-0.8
2,086,217	+		DZA65_RS09885	0.81	+0.3
2,086,218	-		DZA65_RS09885	0.81	-1.1
2,086,218	-		DZA65_RS09885	0.81	-0.9
2,086,218	-		DZA65_RS09885	0.81	-1.1
2,086,316	+		DZA65_RS09885	0.85	-0.7
2,086,317	-		DZA65_RS09885	0.85	+0.7
2,086,370	+		DZA65_RS09885	0.87	-1.1
2,086,371	-		DZA65_RS09885	0.87	+0.1
2,086,526	+				+0.8
2,086,526	+				-0.7
2,086,534	+				-0.4
2,086,534	+				-0.2
2,086,534	+				-2.1
2,086,534	+				-0.3
2,086,534	+				-0.1
2,086,534	+				-0.3
2,086,534	+				-0.2
2,086,535	-				-0.6
2,086,535	-				-2.3
2,086,535	-				+1.1
2,086,535	-				+0.6
2,086,535	-				-0.1
2,086,535	-				-0.2
2,086,535	-				-0.5
2,086,658	+				-1.5
2,086,658	+				-0.9
2,086,659	-				+0.4
2,086,659	-				-0.1
2,086,659	-				+1.7
2,086,671	+				-0.7
2,086,671	+				-0.7
2,086,672	-				+0.7
2,086,672	-				-1.1
2,086,693	+				-1.7
2,086,694	-				+0.4
2,086,697	+				-0.1
2,086,698	-				+1.0
2,086,698	-				+0.6
2,086,698	-				-0.2
2,086,698	-				-1.2
2,086,698	-				+1.5
2,086,831	+				+0.0
2,086,832	-				-1.3
2,086,832	-				+1.8
2,086,834	+				-0.4
2,086,834	+				+0.3
2,086,834	+				+0.2
2,086,835	-				+0.4
2,086,835	-				-0.9
2,086,835	-				-0.2
2,086,835	-				-1.0
2,086,838	+				-0.1
2,086,838	+				+0.2
2,086,838	+				-0.3
2,086,838	+				+1.1
2,086,839	-				+0.5
2,086,843	-				-1.3
2,086,847	+				+1.0
2,086,853	+				+0.9
2,086,900	+				+0.7
2,087,175	-				-0.3
2,087,237	-				+0.3
2,087,237	-				+0.0
2,087,255	+				+0.2
2,087,256	-				-1.9
2,087,256	-				-0.9
2,087,256	-				-0.3
2,087,256	-				+0.1
2,087,322	+				+1.3
2,087,323	-		DZA65_RS09895	0.10	+0.9
2,087,323	-		DZA65_RS09895	0.10	+0.2
2,087,355	+		DZA65_RS09895	0.14	-0.9
2,087,355	+		DZA65_RS09895	0.14	+0.1
2,087,355	+		DZA65_RS09895	0.14	-1.9
2,087,399	+		DZA65_RS09895	0.20	-0.9
2,087,412	+		DZA65_RS09895	0.22	-1.0
2,087,412	+		DZA65_RS09895	0.22	+0.4
2,087,412	+		DZA65_RS09895	0.22	+0.9
2,087,476	+		DZA65_RS09895	0.31	-1.1
2,087,476	+		DZA65_RS09895	0.31	+1.4
2,087,476	+		DZA65_RS09895	0.31	-1.5
2,087,477	-		DZA65_RS09895	0.31	-0.1
2,087,489	+		DZA65_RS09895	0.33	-0.7
2,087,540	+		DZA65_RS09895	0.40	-0.1
2,087,545	+		DZA65_RS09895	0.40	-0.2
2,087,545	+		DZA65_RS09895	0.40	+0.3
2,087,545	+		DZA65_RS09895	0.40	+0.3
2,087,545	+		DZA65_RS09895	0.40	-0.7
2,087,545	+		DZA65_RS09895	0.40	-0.9
2,087,545	+		DZA65_RS09895	0.40	-1.1
2,087,545	+		DZA65_RS09895	0.40	-0.1
2,087,545	+		DZA65_RS09895	0.40	-0.8
2,087,545	+		DZA65_RS09895	0.40	+0.7
2,087,545	+		DZA65_RS09895	0.40	+0.4
2,087,545	+		DZA65_RS09895	0.40	-1.2
2,087,546	-		DZA65_RS09895	0.41	-0.3
2,087,546	-		DZA65_RS09895	0.41	+0.0
2,087,546	-		DZA65_RS09895	0.41	+0.1
2,087,546	-		DZA65_RS09895	0.41	+0.4
2,087,546	-		DZA65_RS09895	0.41	-1.1
2,087,546	-		DZA65_RS09895	0.41	-0.9
2,087,546	-		DZA65_RS09895	0.41	-1.7
2,087,546	-		DZA65_RS09895	0.41	+0.3
2,087,618	+		DZA65_RS09895	0.50	+0.8
2,087,618	+		DZA65_RS09895	0.50	-0.2
2,087,618	+		DZA65_RS09895	0.50	-0.5
2,087,618	+		DZA65_RS09895	0.50	-0.3
2,087,619	-		DZA65_RS09895	0.51	+0.2
2,087,619	-		DZA65_RS09895	0.51	-0.2
2,087,620	+		DZA65_RS09895	0.51	-0.2
2,087,620	+		DZA65_RS09895	0.51	-0.7
2,087,620	+		DZA65_RS09895	0.51	+0.2
2,087,620	+		DZA65_RS09895	0.51	+0.2
2,087,620	+		DZA65_RS09895	0.51	-0.0
2,087,621	-		DZA65_RS09895	0.51	-0.0
2,087,621	-		DZA65_RS09895	0.51	+0.7
2,087,621	-		DZA65_RS09895	0.51	-0.8
2,087,621	-		DZA65_RS09895	0.51	-0.6
2,087,621	-		DZA65_RS09895	0.51	-0.6